There has been little study of whether different variants of tropical rainforest have distinct soil microbial communities and levels of diversity. We compared bacterial and fungal community composition and diversity between primary mixed dipterocarp, secondary mixed dipterocarp, white sand heath, inland heath, and peat swamp forests in Brunei Darussalam, Northwest Borneo by analyzing Illumina Miseq sequence data of 16S rRNA gene and ITS1 region. We hypothesized that white sand heath, inland heath and peat swamp forests would show lower microbial diversity and relatively distinct microbial communities (compared to MDF primary and secondary forests) due to their distinctive environments. We found that soil properties together with bacterial and fungal communities varied significantly between forest types. Alpha and beta-diversity of bacteria was highest in secondary dipterocarp and white sand heath forests. Also, bacterial alpha diversity was strongly structured by pH, adding another instance of this widespread pattern in nature. The alpha diversity of fungi was equally high in all forest types except peat swamp forest, although fungal beta-diversity was highest in primary and secondary mixed dipterocarp forests. The relative abundance of ectomycorrhizal (EcM) fungi varied significantly between forest types, with highest relative abundance observed in MDF primary forest. Overall, our results suggest that the soil bacterial and fungal communities in these forest types are to a certain extent predictable and structured by soil properties, but that diversity is not determined by how distinctive the conditions are. This contrasts with the diversity patterns seen in rainforest trees, where distinctive soil conditions have consistently lower tree diversity.

Tropical forests undisputedly harbor the largest share of global plant diversity, but the mechanisms of maintenance for this diversity cannot be well understood without good data on environmental variables, primarily soil characteristics. This study investigates differences in soil physico-chemical properties in various tropical lowland forest types in Brunei Darussalam, in the Northwest Borneo plant diversity hotspot. Nine different vegetation types were investigated: intact primary mixed-dipterocarp forest, old disturbed secondary forest, young disturbed secondary forest (partly invaded by alien Acacias), heath (Kerangas) forest, peat swamp forest, swampy heath (Kerapah) forest, core mangrove, fringe mangrove and island mangrove forests. Nine 60 x 20 m plots were set up, and sampled for soils at topsoil (0-15 cm depth) and subsoil (15-30 cm depth) layers. Soil gravimetric water and organic matter content, texture, nutrient concentrations, pH, and salinity were determined. The peat swamp and core mangrove forests recorded highest soil nutrient concentrations. Peat swamp forest had the highest GWC, OM content, total N, and total Ca recorded, whereas the soil in core mangrove forest had higher total P, total Mg, total K, exchangeable Mg, exchangeable Ca, exchangeable K and salinity compared to the other habitat types. These results were also highlighted by the principal component analysis for the soil parameters measured. The most nutrient-poor soils were found in the Kerapah and heath forest sites. The difference between topsoil and subsoil for soil variables were generally not significantly different from each other. The present study has shown that soil physico-chemical properties differ significantly between the nine vegetation types studied, and this may have important implications upon differences seen in plant community compositions in these vegetation types.

Invasive Acacia species are known to modify soil properties, although effects are often site-specific. We examined the impact of Acacia species on the soils of intact and invaded habitats of two contrasting tropical lowland rain forest types in Brunei Darussalam: heath forest (HF) and mixed dipterocarp forest (MDF). Impacts on soil properties differed between the two forest types. Overall, Acacia-invaded HF soil recorded significantly higher gravimetric water content, pH and total P, K and Ca compared to the intact HF soil. In contrast, invaded MDF soil exhibited significantly higher organic matter content and total soil N, P, K and Mg compared to its intact habitat. Acacia-invaded MDF soils were more nutrient-enriched than Acacia-invaded HF soils by the addition of threefold, threefold and fourfold total soil P, K and Mg, respectively. The positive effect of addition of total soil Ca was, however, fourfold greater in HF soil than MDF soil, indicating that the magnitude of impact on soil properties was strongly site-specific. Overall, Acacia invasion significantly impacted soil properties in nutrient-rich MDF more than those of nutrient-poor HFs, indicating a potential vulnerability of MDFs to invasion.

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Little is known of how soil archaeal community composition and diversity differ between local variants of tropical rainforests. We hypothesized that (1) as with plants, animals, fungi, and bacteria, the soil archaeal community would differ between different variants of tropical forest; (2) that spatially rarer forest variants would have a less diverse archaeal community than common ones; (3) that a history of forest disturbance would decrease archaeal alpha- and beta-diversity; and (4) that archaeal distributions within the forest would be governed more by deterministic than stochastic factors. We sampled soil across several different forest types within Brunei, Northwest Borneo. Soil DNA was extracted, and the 16S rRNA gene of archaea was sequenced using Illumina MiSeq. We found that (1) as hypothesized, there are distinct archaeal communities for each forest type, and community composition significantly correlates with soil parameters including pH, organic matter, and available phosphorous. (2) As hypothesized, the "rare" white sand forest variants kerangas and inland heath had lower archaeal diversity. A nestedness analysis showed that archaeal community in inland heath and kerangas was mainly a less diverse subset of that in dipterocarp forests. However, primary dipterocarp forest had the lowest beta-diversity among the other tropical forest types. (3) Also, as predicted, forest disturbance resulted in lower archaeal alpha-diversity-but increased beta-diversity in contrast with our predictions. (4) Contrary to our predictions, the BetaNTI of the various primary forest types indicated community assembly was mainly stochastic. The possible effects of these habitat and disturbance-related effects on N cycling should be investigated.