BackgroundBoth microRNA (miR)-196a and miR-196b are implicated in normal cell differentiation, proliferation, and in tumorigenesis of various cancer types. Especially, miR-196a exerts a pro-oncogenic influence in colorectal cancer (CRC) cells and miR-196b expression is upregulated in CRC tissues. The aim of this study was to evaluate the associations of miR-196a and miR-196b dysregulation with clinicopathological characteristics and prognosis in patients with CRC.MethodsQuantitative real time-PCR (qRT-PCR) was performed to detect the expression levels of miR-196a and miR-196b in 126 pairs of fresh tumor samples matched with adjacent colorectal mucosa obtained from 126 patients with CRC.ResultsmiR-196a and miR-196b expression levels in CRC tissues were significantly higher than those in adjacent colorectal mucosa (both P < 0.002). Interestingly, the expression levels of miR-196a in CRC tissues were positively correlated with those of miR-196b. Then, high miR-196a expression and high miR-196b expression, alone or in combination, were all statistically linked to the presence of lymph node metastasis, the poor differentiation grade, and the advanced TNM stage of CRC. Moreover, overall and disease-free survivals of CRC patients with high miR-196a expression, high miR-196b expression and miR-196a-high/miR-196b-high expression tended to be shorter than the corresponding control groups (log-rank statistic, all P < 0.001). Furthermore, multivariate analysis indicated miR-196a and/or miR-196b expression as independent prognostic indicators for CRC patients (all P < 0.05).ConclusionsBoth miR-196a and miR-196b may be correlated with aggressive progression and unfavorable clinical outcome in CRC patients. Combined expression of miR-196a and miR-196b may be a promising biomarker in identifying a poor prognosis group of CRC.
Summary
Verticillium dahliae
is a broad host‐range pathogen that causes vascular wilts in plants. Interactions between three hosts and specific
V. dahliae
genotypes result in severe defoliation. The underlying mechanisms of defoliation are unresolved.
Genome resequencing, gene deletion and complementation, gene expression analysis, sequence divergence, defoliating phenotype identification, virulence analysis, and quantification of
V. dahliae
secondary metabolites were performed.
Population genomics previously revealed that G‐
LSR
2 was horizontally transferred from the fungus
Fusarium oxysporum
f. sp.
vasinfectum
to
V. dahliae
and is exclusively found in the genomes of defoliating (D) strains. Deletion of seven genes within G‐LSR2, designated as
VdDf
genes, produced the nondefoliation phenotype on cotton, olive, and okra but complementation of two genes restored the defoliation phenotype. Genes
VdDf5
and
VdDf6
associated with defoliation shared homology with polyketide synthases involved in secondary metabolism, whereas
VdDf7
shared homology with proteins involved in the biosynthesis of
N
‐lauroylethanolamine (
N
‐acylethanolamine (
NAE
) 12:0), a compound that induces defoliation.
NAE
overbiosynthesis by D strains also appears to disrupt
NAE
metabolism in cotton by inducing overexpression of fatty acid amide hydrolase.
The
VdDf
s modulate the synthesis and overproduction of secondary metabolites, such as
NAE
12:0, that cause defoliation either by altering abscisic acid sensitivity, hormone disruption, or sensitivity to the pathogen.
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