A series of structurally similar fluorescent probes (1-4), synthesized from rhodamine B, were designed to optically measure pH. Each probe had a unique "off-on" response as the solution went from basic to acidic. Probes 1-3 exhibited a spiro-cyclic quenching of the pyronin B fluorophore, whereas probe 4 is quenched by PET from the amine moiety.A chemical sensor capable of measuring pH by optical methods has important implications in analytical and biological chemistry. Fluorescence based probes have demonstrated a superior ability in the detection of various analytes with high sensitivity and low detection limits. In cellular biology, the pH of specific and localized areas of the cell can be an important indication of cellular events.1 Such information could potentially be useful in the diagnosis of specific diseases. For example, colorectal cancer,2 breast cancer2b , 3, cystic fibrosis,4 and neurodegenerative disorders5 have all been linked to abnormal pH regulation, resulting in localized pH values of 4.5-6.0 that are referred to as the acidic window. Currently, a large number of fluorescence based pH sensors have been reported in the literature and are commercially available.6 However, many of these probes lack sensitivity or are simply non-responsive in the so-called "acidic window". Therefore, it would be of great benefit to aid in the diagnosis of these diseases by developing new and more sensitive probes for the measurement of pH.Many fluorescent probes operate in an "off-on" fashion, where in the "off" state the fluorescence is quenched, while the "on" state the fluorophore is fully fluorescent with a high quantum yield. Among the many fluorophores that potentially could be used as pH sensors, pyronin B has particular advantages in biological imaging because of its high quantum yield (Φ= 0.35), longer excitation and emission wavelength (550-600 nm), spectral insensitivity to solvent polarity, pH, and a high tolerance to photobleaching.7 With these criteria in mind, we set out to design a mode of regulating the fluorescence of this fluorophore by synthesizing various benzylamine derivatives at the 9-position, which have Correspondence to: Daniel J. Dyer, ddyer@chem.siu.edu. Supporting Information Available: Detailed synthetic procedures and spectra. This material is available free of charge via the Internet at http://pubs.acs.org.
NIH Public Access Author ManuscriptOrg Lett. Author manuscript; available in PMC 2011 July 16. Starting with commercially available rhodamine B, we synthesized various benzylamine structures; (see supporting information for synthesis details), where the amine moiety is primary, secondary, and tertiary ( Figure 1). The rhodamine-based literature is rife with fluorescent probes that are regulated by a spirocyclic structure. These spirocyclic compounds lack absorbance and fluorescence, in visible spectrum, when engaged in the spirocyclic form but will open upon binding to specific analytes to restore the fluorophore and fluorescence intensity of that compound. Typically, th...