Two novel classes of cavitand-based coordination cages 7a--j and 8a--d have been synthesized via self-assembly procedures. The main factors controlling cage self-assembly (CSA) have been identified in (i) a P--M--P angle close to 90 degrees between the chelating ligand and the metal precursor, (ii) Pd and Pt as metal centers, (iii) a weakly coordinated counterion, and (iv) preorganization of the tetradentate cavitand ligand. Calorimetric measurements and dynamic (1)H and (19)F NMR experiments indicated that CSA is entropy driven. The temperature range of the equilibrium cage-oligomers is determined by the level of preorganization of the cavitand component. The crystal structure of cage 7d revealed the presence of a single triflate anion encapsulated. Guest competition experiments revealed that the encapsulation preference of cages 7b,d follows the order BF(4)(-) > CF(3)SO(3)(-) >> PF(6)(-) at 300 K. ES-MS experiments coupled to molecular modeling provided a rationale for the observed encapsulation selectivities. The basic selectivity pattern, which follows the solvation enthalpy of the guests, is altered by size and shape of the cavity, allowing the entrance of an ancillary solvent molecule only in the case of BF(4)(-).

A continuous flow micro total analysis system (micro-TAS) consisting of an on-chip microfluidic device connected to a matrix assisted laser desorption ionization [MALDI] time-of-flight [TOF] mass spectrometer (MS) as an analytical screening system is presented. Reaction microchannels and inlet/outlet reservoirs were fabricated by powderblasting on glass wafers that were then bonded to silicon substrates. The novel lab-on-a-chip was realized by integrating the microdevice with a MALDI-TOFMS standard sample plate used as carrier to get the microfluidic device in the MALDI instrument. A novel pressure-driven pumping mechanism using the vacuum of the instrument as a driving force induces flow in the reaction microchannel in a self-activating way. Organic syntheses as well as biochemical reactions are carried out entirely inside the MALDI-MS ionization vacuum chamber and analyzed on-line by MALDI-TOFMS in real time. The effectiveness of the micro-TAS system has been successfully demonstrated with several examples of (bio)chemical reactions.

A new building block is constructed with one pyridine and two kinetically inert complexed Pd(II) ions, for the controlled assembly of metallodendrimers following either a convergent or a divergent route. The double pincer ligand 8 was cyclopalladated with Pd[CH3CN]4(BF4)2 and subsequently converted into the neutral bis-palladium chloride complex 3. The pyridine moiety of 3, that is covalently attached to the spacer bridging the two pincer complexes, coordinates to activated palladium centers. Via a combination of pyridine- (3) and cyano-based (2) building blocks, dendrons up to generation three were assembled and characterized with 1H NMR and FT-IR spectroscopy and MALDI-TOF mass spectrometry. These dendrons can coordinate through a cyano ligand to an activated nucleus 1 forming convergently assembled metallodendrimers. Alternatively, building blocks 3 were used in the divergent assembly of more stable metallodendrimers, because of the stronger coordination of pyridine compared to cyano ligands. The formation of metallodendrimers is evidenced by IR and 1H NMR spectroscopy and electro spray and MALDI-TOF mass spectrometry.

The molecular structure of a series of hyperbranched polyesteramides was studied using size exclusion chromatography (SEC), mass spectrometry (MS) and small-angle neutron scattering (SANS). Products with increasing molecular mass were obtained through the polycondensation of in situ produced AB 2-like monomeric units. Electrospray ionization MS indicates that narrow SEC fractions consist of different isomers, the number of which increases with molecular mass. Molecular mass moments and polydispersity numbers increase with polycondensation degree. The SANS measurements and SEC-DV data yield values for the polymers fractal dimension, which can be rationalized in the framework of percolation theory that originally was designed for randomly branched polymers. Randomly branched polymer behavior in this particular case possibly results from a side reaction involving reactivity among B-end groups.

From Tabernaemontana chippii root bark, forty-five alkaloids were isolated; thirty-four were fully characterized by means of their spectral data and/or co-tlc; eight alkaloids were new, four of them being 3-hydroxy derivatives of known dimeric voacamine type alkaloids. Most of the twenty-six known alkaloids belonged to the corynanthean, ibogan, or bisindole classes. The structures of eleven other alkaloids--all minor--were only partially elucidated, most of them being new alkaloids. All the dimeric alkaloids were shown to possess strong antimicrobial activity against gram-positive bacteria and moderate to weak activity against gram-negative bacteria.

Chemical reactivity and spectroscopy of the thiol ester-linked p-coumaric acid chromophore in the photoactive yellow protein from Ectothiorhodospira halophila Hoff, W.D.; Devreese, B.; Fokkens, R.H.; Nugteren-Roodzant, J.M.; Beeumen, J.; Nibbering, N.M.M.; Hellingwerf, K.J. Published in: Biochemistry DOI:10.1021/bi951755zLink to publication Citation for published version (APA):Hoff, W. D., Devreese, B., Fokkens, R. H., Nugteren-Roodzant, J. M., Beeumen, J., Nibbering, N. M. M., & Hellingwerf, K. J. (1996). Chemical reactivity and spectroscopy of the thiol ester-linked p-coumaric acid chromophore in the photoactive yellow protein from Ectothiorhodospira halophila. Biochemistry, 35, 1274-1281/1284. DOI: 10.1021/bi951755z General rightsIt is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulationsIf you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: http://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. Here we report on the chemistry of the linkage of this new photoactive cofactor to apoPYP: (i) Analysis of chromophore-peptide conjugates of PYP by high-resolution mass spectrometry unambiguously shows that the p-coumaric acid molecule is bound to Cys 69 via a thiol ester bond. The PYP chromophore is the first cofactor known to be stably thiol ester-linked to its apoprotein.(ii) The chemical reactivity of this thiol ester bond with respect to dithiothreitol, performic acid, and high pH is similar to that of disulfide bridges. These treatments result in the cleavage of the thiol ester bond, concomitant with strong shifts in the UV/vis absorbance band of the chromophore. (iii) The spectral properties of the PYP chromophore under different conditions are related to the structural integrity of the protein, the presence of the thiol ester bond, and the ionization state of the phenolic proton of the chromophore. These results are important for the general problem of spectral tuning in photoreceptor proteins.

Hyperbranched polyesteramides (DA2), prepared from hexahydrophthalic anhydride (D) and diisopropanolamine (A) have been characterized, by use of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS), field desorption (FD)-MS, and electrospray ionization (ESI)-MS. MALDI of polyesteramides produces protonated molecules. The spectra show a complex chemical composition distribution and end-group distribution which are mainly composed of two series of homologous oligomers DnA(n)+1 - mH2O and DnA(n) - mH2O, where m = 1-2. Signals from protonated molecules DnAn+1 and DnAn are almost absent in the MALDI spectrum, whereas these ions are responsible for the base peak of DnA(n)+1 - mH2O and DnA(n) - mH2O (m = 1-2) clusters in the ESI spectrum. The absence of -OH end-groups signals in the MALDI spectrum is due to a metastable decay of protonated DnA(n)+1 and DnAn ions in the ion source of the MALDI mass spectrometer prior to ion extraction. In-source decay results in the formation of protonated lower DnA(n)+1 - mH2O and DnA(n) - mH2O oligomers and their corresponding neutrals, leading to wrong conclusions concerning the relative end-group distribution as a function of the degree of polymerization and the chemical composition.

Ein dual kodiertes dynamisches Material wurde wie im Schema dargestellt durch bimodale Selbstorganisation gebildet. Die Kombination zweier orthogonaler und reversibler Wechselwirkungen (solvophobe Aggregation (SA) und Metallkoordination (MK)) ermöglicht die präzise Steuerung der einzelnen Stufen des Selbstorganisationszyklus, der zu stabförmigen supramolekularen Aggregaten führt.