Emerging pollutants in nature are linked to various acute and chronic detriments in biotic components and subsequently deteriorate the ecosystem with serious hazards. Conventional methods for removing pollutants are not efficient; instead, they end up with the formation of secondary pollutants. Significant destructive impacts of pollutants are perinatal disorders, mortality, respiratory disorders, allergy, cancer, cardiovascular and mental disorders, and other harmful effects. The pollutant substrate can recognize different microbial enzymes at optimum conditions (temperature/pH/contact time/concentration) to efficiently transform them into other rather unharmful products. The most representative enzymes involved in bioremediation include cytochrome P450s, laccases, hydrolases, dehalogenases, dehydrogenases, proteases, and lipases, which have shown promising potential degradation of polymers, aromatic hydrocarbons, halogenated compounds, dyes, detergents, agrochemical compounds, etc. Such bioremediation is favored by various mechanisms such as oxidation, reduction, elimination, and ring-opening. The significant degradation of pollutants can be upgraded utilizing genetically engineered microorganisms that produce many recombinant enzymes through eco-friendly new technology. So far, few microbial enzymes have been exploited, and vast microbial diversity is still unexplored. This review would also be useful for further research to enhance the efficiency of degradation of xenobiotic pollutants, including agrochemical, microplastic, polyhalogenated compounds, and other hydrocarbons.
Background Hypercholesterolemia has posed a serious threat of heart diseases and stroke worldwide. Xanthine oxidase (XO), the rate-limiting enzyme in uric acid biosynthesis, is regarded as the root of reactive oxygen species (ROS) that generate atherosclerosis and cholesterol crystals. β-Hydroxy β-methylglutaryl-coenzyme A reductase (HMGR) is a rate-limiting enzyme in cholesterol biosynthesis. Although some commercially available enzyme inhibiting drugs have effectively reduced cholesterol levels, most of them have failed to meet potential drug candidates’ requirements. Here, we have carried out an in-silico analysis of secondary metabolites that have already shown good inhibitory activity against XO and HMGR in a wet lab setup. Methods Out of 118 secondary metabolites reviewed, sixteen molecules inhibiting XO and HMGR were selected based on the IC50 values reported in in vitro assays. Further, receptor-based virtual screening was carried out against secondary metabolites using GOLD Protein-Ligand Docking Software, combined with subsequent post-docking, to study the binding affinities of ligands to the enzymes. In-silico ADMET analysis was carried out to explore their pharmacokinetic properties, followed by toxicity prediction through ProTox-II. Results The molecular docking of amentoflavone (GOLD score 70.54, ∆G calc. = − 10.4 Kcal/mol) and ganomycin I (GOLD score 59.61, ∆G calc. = − 6.8 Kcal/mol) displayed that the drug has effectively bound at the competitive site of XO and HMGR, respectively. Besides, 6-paradol and selgin could be potential drug candidates inhibiting XO. Likewise, n-octadecanyl-O-α-D-glucopyranosyl (6′ → 1″)-O-α-D-glucopyranoside could be potential drug candidates to maintain serum cholesterol. In-silico ADMET analysis has shown that these sixteen metabolites were optimal within the categorical range compared to commercially available XO and HMGR inhibitors, respectively. Toxicity analysis through ProTox-II revealed that 6-gingerol, ganoleucoin K, and ganoleucoin Z are toxic for human use. Conclusion This computational analysis supports earlier experimental evidence towards the inhibition of XO and HMGR by natural products. Further study is necessary to explore the clinical efficacy of these secondary molecules, which might be alternatives for the treatment of hypercholesterolemia.
Natural products and their derivatives are known to be useful for treating numerous diseases since ancient times. Because of their high therapeutic potentials, the use of different medicinal plants is possible to treat varied inflammation‐mediated chronic diseases. Among natural products, phytosteroids have emerged as promising compounds mostly because they have diverse pharmacological activities. Currently, available medications exert numerous systemic toxicities, including hypertension, immune suppression, osteoporosis, and metabolic abnormalities. Thus, further research on phytosteroids to subside these complications is of significant importance. In this study, the information on phytosteroids, their types, and actions against inflammation, and allergic complications was collected by a systematic survey of literature on several scientific search engines. The literature review suggested that phytosteroids exhibit antiinflammatory action via different modes through transrepression or selective COX‐2 enzymes. Also, in silico ADMET analysis was carried out on available phytosteroids to uncover their pharmacokinetic properties. Our analysis has shown that eight compounds: withaferin A, stigmasterol, β‐sitosterol, guggulsterone, diosgenin, sarsasapogenin, physalin A, and dioscin, −isolated from medicinal plants show similar pharmacokinetic properties as compared to dexamethasone, commercially available glucocorticoid. These phytosteroids could be useful for the treatment of inflammatory diseases, such as rheumatoid arthritis, inflammatory bowel diseases, multiple sclerosis, asthma, and cardiovascular diseases. Thus, systematic research is required to explore potent phytosteroids with lesser side effects, which might substitute the current medications.
The potential applications of Ag NPs are exciting and beneficial in a variety of fields; however, there is less awareness of the new risks posed by inappropriate disposal of Ag NPs. The Ag NPs have medicinal, plasmonic, and catalytic properties. The Ag NPs can be prepared via physical, chemical, or biological routes, and the selection of any specific route depends largely on the end-use. The downside of a physical and chemical approach is that it requires a wide space, high temperature, high temperature for a longer time to preserve the thermal stability of synthesized Ag NPs, and the use of toxic chemicals. Although these methods produce nanoparticles with high purity and well-defined morphology, it is critical to develop cost-effective, energy-efficient, and facile route, such as green synthesis; it suggests the desirable use of renewable resources by avoiding the use of additional solvents and toxic reagents in order to achieve the ultimate goal. However, each method has its pros and cons. The synthesized Ag NPs obtained using the green approach have larger biocompatibility and are less toxic towards the biotic systems. However, identifying the phytoconstituents that are responsible for nanoparticle synthesis is difficult and has been reported as a suitable candidate for biological application. The concentration of the effective bioreducing phytoconstituents plays a crucial role in deciding the morphology of the nanoparticle. Besides these reaction times, temperature, pH, and concentration of silver salt are some of the key factors that determine the morphology. Hence, careful optimization in the methodology is required as different morphologies have different properties and usage. It is due to which the development of methods to prepare nanoparticles effectively using various plant extracts is gaining rapid momentum in recent days. To make sense of what involves in the bioreduction of silver salt and to isolate the secondary metabolites from plants are yet challenging. This review focuses on the contribution of plant-mediated Ag NPs in different applications and their toxicity in the aquatic system.
Plastic pollution in various forms has emerged as the most severe environmental threat. Small plastic chunks, such as microplastics and nanoplastics derived from primary and secondary sources, are a major concern worldwide due to their adverse effects on the environment and public health. Several years have been spent developing robust spectroscopic techniques that should be considered top-notch; however, researchers are still trying to find efficient and straightforward methods for the analysis of microplastics but have yet to develop a viable solution. Because of the small size of these degraded plastics, they have been found in various species, from human brains to blood and digestive systems. Several pollution-controlling methods have been tested in recent years, and these methods are prominent and need to be developed. Bacterial degradation, sunlight-driven photocatalyst, fuels, and biodegradable plastics could be game-changers in future research on plastic pollution control. However, recent fledgling steps in controlling methods appear insufficient due to widespread contamination. As a result, proper regulation of environmental microplastics is a significant challenge, and the most equitable way to manage plastic pollution. Therefore, this paper discusses the current state of microplastics, some novel and well-known identification techniques, strategies for overcoming microplastic effects, and needed solutions to mitigate this planetary pollution. This review article, we believe, will fill a void in the field of plastic identification and pollution mitigation research.
The in silico method has provided a versatile process of developing lead compounds from a large database in a short duration. Therefore, it is imperative to look for vaccinations and medications that can stop the havoc caused by SARS-CoV-2. The spike protein of SARS-CoV-2 is required for the viral entry into the host cells, hence inhibiting the virus from fusing and infecting the host. This study determined the binding interactions of 36 flavonoids along with two FDA-approved drugs against the spike protein receptor-binding domain of SARS-CoV-2 through molecular docking and molecular dynamics (MD) simulations. In addition, the molecular mechanics generalized Born surface area (MM/GBSA) approach was used to calculate the binding-free energy (BFE). Flavonoids were selected based on their in vitro assays on SARS-CoV and SARS-CoV-2. Our pharmacokinetics study revealed that cyanidin showed good drug-likeness, fulfilled Lipinski’s rule of five, and conferred favorable toxicity parameters. Furthermore, MD simulations showed that cyanidin interacts with spike protein and alters the conformation and binding-free energy suited. Finally, an in vitro assay indicated that about 50% reduction in the binding of hACE2 with S1-RBD in the presence of cyanidin-containing red grapes crude extract was achieved at approximately 1.25 mg/mL. Hence, cyanidin may be a promising adjuvant medication for the SARS-CoV-2 spike protein based on in silico and in vitro research.
The nanomaterial industry has focused on green synthetic methods to avoid unpleasant compounds produced during manufacturing, offering eco-friendly, sustainable, and nature-derived alternative methods. In this study, silver nanoparticles (Ag NPs) have been synthesized from an aqueous extract of the leaves of Rhododendron arboreum, where the pH of the reaction mixture is found to be crucial. The reaction progress monitored using the UV-Vis spectrophotometer displayed a strong absorption band at 425 nm at pH 9, suggesting an optimum pH for the synthesis. The Ag NPs thus synthesized were characterized using instrumental techniques. The attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy showed the presence of phytoconstituents in the aqueous extract, which are believed to be responsible for reducing Ag+ ions to Ag NPs and capping agents on its surface for stability. X-ray diffraction (XRD) showed a highly crystalline nature, and energy-dispersive X-ray (EDX) demonstrated the presence of metallic silver. The scanning and transmission electron microscopy (SEM and TEM, respectively) revealed crystalline morphology and monodisperse Ag NPs of sizes ranging from 23 to 41 nm. Furthermore, the metal-sensing activity of biosynthesized Ag NPs was evaluated using various metal ions; they were utilized for highly selective and sensitive colorimetric detection of Hg2+ in an aqueous medium among various metal ion solutions tested with the detection limit of 0.5 mM using the UV-Vis spectrophotometer. Similarly, they were also shown to be effective for the nanocatalytic activity for degradation of methylene blue dye up to 81%. These studies demonstrated Ag NPs as potential candidates for selective detection of mercury in water resources, a tool for sensing the heavy metals and degradation of synthetic dye from industrial effluents in wastewater treatment. Having the high surface-to-volume ratio and size-dependent functionality of Ag NPs, further optimization studies at micromolar and nanomolar detection limits will avail its better industrial utilization. Moreover, biologically mediated Ag NPs can also exhibit good antimicrobial activity against Staphylococcus aureus and Escherichia coli.
The COVID-19 pandemic has affected higher education institutions (HEIs) worldwide and reshaped the existing educational system. Due to travel constraints and physical separation, there has been a global shift toward distance learning, and Nepal is no exception. This research intends to assess the practicality of online education by evaluating learners' experiences amidst COVID-19. A cross-sectional study was directed among HEIs students in Nepal using self-structured questionnaires. Our study revealed that 64.6% of the respondents were unsatisfied with online classes. More than half of the respondents (53.4%) use cell phones for online studies. Online education was reported to be unappealing to 28.8% of respondents. Variables such as age group (p = 0.05), enjoying class (p < 0.001), hours spent for an online class in a day (p = 0.05), and period for educational work using an electronic device (p = 0.1) were found significant with satisfaction level using both bivariate test and inferential test of univariate binary logistics regression. The challenges and opportunities encountered among students and faculties are highlighted along with the recommendations for fortifying communication in online-based teaching/learning.
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