We introduce a model for provable data possession (PDP) that allows a client that has stored data at an untrusted server to verify that the server possesses the original data without retrieving it. The model generates probabilistic proofs of possession by sampling random sets of blocks from the server, which drastically reduces I/O costs. The client maintains a constant amount of metadata to verify the proof. The challenge/response protocol transmits a small, constant amount of data, which minimizes network communication. Thus, the PDP model for remote data checking supports large data sets in widely-distributed storage systems.We present two provably-secure PDP schemes that are more efficient than previous solutions, even when compared with schemes that achieve weaker guarantees. In particular, the overhead at the server is low (or even constant), as opposed to linear in the size of the data. Experiments using our implementation verify the practicality of PDP and reveal that the performance of PDP is bounded by disk I/O and not by cryptographic computation.
We describe automated technologies to probe the structure of neural tissue at nanometer resolution and use them to generate a saturated reconstruction of a sub-volume of mouse neocortex in which all cellular objects (axons, dendrites, and glia) and many sub-cellular components (synapses, synaptic vesicles, spines, spine apparati, postsynaptic densities, and mitochondria) are rendered and itemized in a database. We explore these data to study physical properties of brain tissue. For example, by tracing the trajectories of all excitatory axons and noting their juxtapositions, both synaptic and non-synaptic, with every dendritic spine we refute the idea that physical proximity is sufficient to predict synaptic connectivity (the so-called Peters' rule). This online minable database provides general access to the intrinsic complexity of the neocortex and enables further data-driven inquiries.
The JHU turbulence database [1] can be used with a state of the art visualisation tool [2] to generate high quality fluid dynamics videos. In this work we investigate the classical idea that smaller structures in turbulent flows, while engaged in their own internal dynamics, are advected by the larger structures. They are not advected undistorted, however. We see instead that the small scale structures are sheared and twisted by the larger scales. This illuminates the basic mechanisms of the turbulent cascade. THE JHU TURBULENCE DATABASEIn [1] a database containing a solution of the 3D incompressible Navier-Stokes (NS) equations is presented. The equations were solved numerically with a standard pseudo-spectral simulation in a periodic domain, using a real space grid of 1024 3 grid points. A large-scale body force drives a turbulent flow with a Taylor microscale based Reynolds number R λ = 433. Out of this solution, 1024 snapshots were stored, spread out evenly over a large eddy turnover time. More on the simulation and on accessing the data can be found at http://turbulence.pha.jhu.edu. In practical terms, we have easy access to the turbulent velocity field and pressure at every point in space and time. VORTICES WITHIN VORTICESOne usual way of visualising a turbulent velocity field is to plot vorticity isosurfaces -see for instance the plots from [3]. The resulting pictures are usually very "crowded", in the sense that there are many intertwined thin vortex tubes, generating an extremely complex structure. In fact, the picture of the entire dataset from [3] looks extremely noisy and it is arguably not very informative about the turbulent dynamics.In this work, we follow a different approach. First of all, we use the alternate quantityfirst introduced in [4]. Secondly, the tool being used has the option of displaying data only inside clearly defined domains of 3D space. We can exploit this facility to investigate the multiscale character of the turbulent cascade. Because vorticity is dominated by the smallest available scales in the velocity, we can visualize vorticity at scale ℓ by the curl of the velocity box-filtered at scale ℓ. We follow a simple procedure:• we filter the velocity field, using a box filter of size ℓ 1 , and we generate semitransparent surfaces delimitating the domains D 1 where Q > q 1 ;• we filter the velocity field, using a box filter of size ℓ 2 < ℓ 1 , and we generate surfaces delimitating the domains D 2 where Q ≥ q 2 , but only if these domains are contained in one of the domains from D 1 ;and this procedure can be used iteratively with several scales (we use at most 3 scales, since the images become too complex for more levels). Additionally, we wish sometimes to keep track of the relative orientation of the vorticity vectors at the different scales. For this purpose we employ a special coloring scheme for the Q isosurfaces: for each point of the surface, we compute the cosine of the angle α between the ℓ 2 filtered vorticity and the ℓ 1 filtered vorticity: cos α = (∇ × u 1 ) · (∇ × u ...
We introduce a model for provable data possession (PDP) that can be used for remote data checking: A client that has stored data at an untrusted server can verify that the server possesses the original data without retrieving it. The model generates probabilistic proofs of possession by sampling random sets of blocks from the server, which drastically reduces I/O costs. The client maintains a constant amount of metadata to verify the proof. The challenge/response protocol transmits a small, constant amount of data, which minimizes network communication. Thus, the PDP model for remote data checking is lightweight and supports large data sets in distributed storage systems. The model is also robust in that it incorporates mechanisms for mitigating arbitrary amounts of data corruption.We present two provably-secure PDP schemes that are more efficient than previous solutions. In particular, the overhead at the server is low (or even constant), as opposed to linear in the size of the data. We then propose a generic transformation that adds robustness to any remote data checking scheme based on spot checking. Experiments using our implementation verify the practicality of PDP and reveal that the performance of PDP is bounded by disk I/O and not by cryptographic computation. Finally, we conduct an in-depth experimental evaluation to study the tradeoffs in performance, security, and space overheads when adding robustness to a remote data checking scheme.
The idea of 'frozen-in' magnetic field lines for ideal plasmas is useful to explain diverse astrophysical phenomena, for example the shedding of excess angular momentum from protostars by twisting of field lines frozen into the interstellar medium. Frozen-in field lines, however, preclude the rapid changes in magnetic topology observed at high conductivities, as in solar flares. Microphysical plasma processes are a proposed explanation of the observed high rates, but it is an open question whether such processes can rapidly reconnect astrophysical flux structures much greater in extent than several thousand ion gyroradii. An alternative explanation is that turbulent Richardson advection brings field lines implosively together from distances far apart to separations of the order of gyroradii. Here we report an analysis of a simulation of magnetohydrodynamic turbulence at high conductivity that exhibits Richardson dispersion. This effect of advection in rough velocity fields, which appear non-differentiable in space, leads to line motions that are completely indeterministic or 'spontaneously stochastic', as predicted in analytical studies. The turbulent breakdown of standard flux freezing at scales greater than the ion gyroradius can explain fast reconnection of very large-scale flux structures, both observed (solar flares and coronal mass ejections) and predicted (the inner heliosheath, accretion disks, γ-ray bursts and so on). For laminar plasma flows with smooth velocity fields or for low turbulence intensity, stochastic flux freezing reduces to the usual frozen-in condition.
Many storage systems rely on replication to increase the availability and durability of data on untrusted storage systems. At present, such storage systems provide no strong evidence that multiple copies of the data are actually stored. Storage servers can collude to make it look like they are storing many copies of the data, whereas in reality they only store a single copy. We address this shortcoming through multiple-replica provable data possession (MR-PDP): A provably-secure scheme that allows a client that stores t replicas of a file in a storage system to verify through a challenge-response protocol that (1) each unique replica can be produced at the time of the challenge and that (2) the storage system uses t times the storage required to store a single replica. MR-PDP extends previous work on data possession proofs for a single copy of a file in a client/server storage system [4]. Using MR-PDP to store t replicas is computationally much more efficient than using a single-replica PDP scheme to store t separate, unrelated files (e.g., by encrypting each file separately prior to storing it). Another advantage of MR-PDP is that it can generate further replicas on demand, at little expense, when some of the existing replicas fail.
High-resolution serial-section electron microscopy (ssEM) makes it possible to investigate the dense meshwork of axons, dendrites, and synapses that form neuronal circuits(1). However, the imaging scale required to comprehensively reconstruct these structures is more than ten orders of magnitude smaller than the spatial extents occupied by networks of interconnected neurons(2), some of which span nearly the entire brain. Difficulties in generating and handling data for large volumes at nanoscale resolution have thus restricted vertebrate studies to fragments of circuits. These efforts were recently transformed by advances in computing, sample handling, and imaging techniques(1), but high-resolution examination of entire brains remains a challenge. Here, we present ssEM data for the complete brain of a larval zebrafish (Danio rerio) at 5.5 days post-fertilization. Our approach utilizes multiple rounds of targeted imaging at different scales to reduce acquisition time and data management requirements. The resulting dataset can be analysed to reconstruct neuronal processes, permitting us to survey all myelinated axons (the projectome). These reconstructions enable precise investigations of neuronal morphology, which reveal remarkable bilateral symmetry in myelinated reticulospinal and lateral line afferent axons. We further set the stage for whole-brain structure-function comparisons by co-registering functional reference atlases and in vivo two-photon fluorescence microscopy data from the same specimen. All obtained images and reconstructions are provided as an open-access resource
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