Methods using genomic information to forecast population maladaptation to climate change are becoming increasingly common, yet the lack of model validation poses serious hurdles toward their incorporation into management and policy. Here, we compare the validation of two methods - Gradient Forests (GF) and the Risk Of Non-Adaptedness - using exome capture pool-seq data from 35 to 39 populations across three conifer taxa: two Douglas-fir varieties and jack pine. We evaluate sensitivity of these algorithms to the number of input populations as well as the source and number of input loci (markers selected from genotype-environment associations [GEA] or those selected at random). We validate these methods against two-year and 52-year growth and mortality measured in independent transplant experiments. Overall, we find that both genetic offset methods often better predict transplant performance than climatic or geographic distances. We also find that while GF models are surprisingly not improved using GEA outliers, they are sensitive to the populations included in analysis. Even with promising validation results, ambiguity of model projections to future climates makes it difficult to identify the most maladapted populations using either method. Our work advances understanding of the sensitivity and applicability of these approaches, and we discuss recommendations for their future use.
The grasslands conversion to forests is occurring globally and modifying the population dynamics of species. Here, we characterized the population dynamics of Podocarpus lambertii Klotzsch ex Endl. over four years in southern Brazilian forest–grassland mosaics. We asked (i) if the studied P. lambertii population would decrease or increase over time and (ii) what the role of forest patches is in the growth and recruitment of a P. lambertii population. Thus, we studied forest–grassland mosaics, stratified the population into four demographic classes, evaluated the population dynamics, and estimated the correlation between canopy cover and average number of individuals. All individuals of P. Lambertii occurred in forest patches. Density was high but decreased from seedlings to the reproductive stage. The population growth rate was λ = 1.025, and the recruitment of individuals was high and variable among years. The transition and mortality rates showed a pattern of reduction from seedlings to the reproductive stage. Mortality rate for seedlings and juveniles was low and concentrated at the smaller heights. The correlations between canopy cover and the average number of individuals were positive and significant. The ecological characteristics of this species and specific conditions provided by forest patches allow population growth and species conservation in the southern Brazilian forest–grassland mosaics.
Spatial genetic structure, population dynamics and spatial patterns in the distribution of Ocotea catharinensis Mez. from southern Brazil: implications for conservation
There is an urgent need for better understanding how populations of trees will respond to predictable changes in climate and the intensification of extreme weather events such as droughts. The distribution of adaptive traits in seedlings is a crucial component of population adaptive potential and its characterization is important for development of management approaches mitigating the effects of climate change on forests. In this study, we used a large-scale common garden drought experiment to characterize the variation in drought tolerance, growth, and plastic responses to extreme summer drought in seedlings of 73 natural provenances of the two main varieties of Douglas-fir (Pseudotsuga menziesii var.menziesiiand var.glauca), sampled across most of their extensive natural ranges. We detected large differences between the two Douglas-fir varieties for all traits assessed, with var.glaucashowing higher tolerance to drought but slower height growth and less plasticity than var.menziesii. Surprisingly, signals of local adaptation to drought within varieties were weak within var.glaucaand nearly absent within var.menziesii. Temperature-related variables were identified as the main climatic drivers of clinal variation in drought tolerance and height growth species-wide, and in height growth within var.menziesii. Furthermore, our data indicate that higher plasticity under extreme droughts could be maladaptive in var.menziesii. Overall, our study suggests that genetic variation for drought tolerance in seedlings is maintained primarily within rather than among provenances within varieties and does not compromise growth at early stages of plant development. Given these results, assisted gene flow is unlikely to help facilitate adaptation to drought within Douglas-fir varieties, but selective breeding within provenances could accelerate adaptation.
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