Nutrient conservation plays an important role in plants adapted to infertile environments. Nutrients can be conserved mainly by extending the life span of plant parts and\or by minimizing the nutrient content of those parts that are abscissed. Together these two parameters (life span and resorption) define the mean residence time (MRT ) of a nutrient. In this review we summarize available information on nitrogen resorption and life span, and evaluate their relationship to the MRT of nitrogen, both between and within species. Abundant information with respect to nitrogen resorption efficiency and life span is available at the leaf level. By definition, woody evergreen plants have a much longer leaf life span than species of other life-forms. Conversely, differences in resorption efficiency among life-forms or among plants in habitats differing in soil fertility appear to be small. Inter-specific variation in leaf life span is much larger than intra-specific variation (factor of 200 compared with 2, respectively), while resorption efficiency varies by about the same magnitude at both levels (factor of 3.8 compared with 2.7, respectively). The importance of resorption efficiency in determining leaf-level MRT increases exponentially towards and above the maximum resorption efficiency observed in nature. This effect is independent of leaf life span, which may explain the lack of life-form related differences in resorption efficiency. When scaling up from the leaf to the whole-plant level, fundamental differences in turnover rate among different plant organs must be considered. Woody species invest c. 50% of their net productivity into their low-turnover stems, while in herbaceous species the life span of stems is only slightly longer than that of leaves. As a result, nutrient turnover of woody (evergreen and deciduous) plants is generally lower than that of herbaceous species (herbs and graminoids) on a whole-plant basis. At the intra-specific level empirical data show that both biomass life span (i.e. the inverse of biomass loss rate) and resorption efficiency are important sources of variation in MRT. However, we argue that the relative importance of resorption efficiency in explaining variation in MRT is lower at the interspecific level, whereas the reverse is true for life span. This is because variation in MRT and life span is much larger at the inter-specific level compared with variation in resorption efficiency. Plant traits related to nutrient conservation are discussed with respect to their implications for leaf structure, plant growth, competition, succession and ecosystem nutrient cycling.
DNA methylation is an important, heritable epigenetic modification in most eukaryotic organisms that is connected with numerous biological processes. To study the impact of natural epigenetic variation in an ecological or evolutionary context, epigenetic studies are increasingly using methylation-sensitive amplification polymorphism (MSAP) for surveys at the population or species level. However, no consensus exists on how to interpret and score the multistate information obtained from the MSAP banding patterns. Here, we review the previously used scoring approaches for population epigenetic studies and develop new alternatives. To assess effects of the different approaches on parameters of epigenetic diversity and differentiation, we applied eight scoring schemes to a case study of three populations of the plant species Viola elatior. For a total number of 168 detected polymorphic MSAP fragments, the number of ultimately scored polymorphic epiloci ranged between 78 and 286 depending on the particular scoring scheme. Both, estimates of epigenetic diversity and differentiation varied strongly between scoring approaches. However, linear regression and PCoA revealed qualitatively similar patterns, suggesting that the scoring approaches are largely consistent. For single-locus analyses of MSAP data, for example the search for loci under selection, we advocate a new scoring approach that separately takes into account different methylation types and thus seems appropriate for drawing more detailed conclusions in ecological or evolutionary contexts. An R script (MSAP_score.r) for scoring and basic data analysis is provided.
Summary1. Plant litter is a key component in terrestrial ecosystems. It plays a major role in nutrient cycles and community organization. Land use and climate change may change the accumulation of litter in herbaceous ecosystems and affect plant community dynamics. Additionally, the transfer of seeds containing plant material (i.e. litter) is a widespread technique in grassland restoration. 2. Ecosystem responses to litter represent the outcome of interactions, whose sign and strength will depend on many variables (e.g. litter amount, seed size). A previous meta-analysis (from 1999) reported that litter had an overall negative effect on seed germination and seedling establishment in different ecosystems. However, recent studies indicated that this might not be the case in grassland ecosystems. 3. We used 914 data from 46 independent studies to analyse the effects of litter on seedling (i) emergence, (ii) survival and (iii) biomass, employing meta-analytical techniques. Each data set was stratified according to methodology, grassland type, irrigation conditions, litter amount and seed size. 4. We found an overall neutral effect of litter presence on seedling emergence and survival and a positive effect on seedling biomass. However, whereas for field experiments the response remained neutral, it was positive for common garden studies. In glasshouse experiments, litter effects were negative for emergence and positive for biomass. 5. Litter may have a positive effect on seedling recruitment in dry grasslands or under water-limited conditions, or in the presence of low to medium litter amounts (< 500 g m À2 ). However, high litter amounts (> 500 g m À2 ) will inhibit seedling recruitment. Large seeds showed a more positive response to litter presence with respect to seedling emergence and survival, but not concerning biomass. 6. Synthesis. Under dry conditions (e.g. dry grasslands or dry periods) or with low to medium litter amounts, litter presence has a positive effect on seedling establishment. However, climate and land use change may promote litter accumulation and reduce seedling establishment, affecting grasslands composition and ecosystem functions.
Summary 1We studied seedling emergence in four familial pairs of floodplain herbs in response to the experimental manipulation of soil moisture and litter cover to analyse (i) whether the effect of litter changes from negative under humid to positive under dry conditions, and (ii) whether the response to changing water and light conditions with increasing litter cover varies among species and plant families. 2 We carried out a controlled pot experiment using four levels of litter cover (0 g, 2 g, 4 g and 8 g litter per pot, corresponding to 0 kg m ) and two levels of water-addition, leading to constantly humid substrate or intermittently dry topsoil. 3 Across water-additions, percentage emergence reached a peak at low levels of litter cover (0.2 kg m − 2 and 0.4 kg m − 2 ). There was a significant litter × water-addition interaction in six species, with positive effects of litter under intermittently dry conditions and negative or neutral effects under constantly humid conditions. Litter lowered maximum temperature as well as amplitude, and alleviated soil humidity under low water supply, while imposing increasingly shaded conditions. Analysis of species-and family-specific responses suggested that germination under a litter cover of 0.8 kg m − 2 was significantly reduced in smaller-seeded species (i.e. those that tend to have higher light demands for germination). . Below these levels, establishment of most species may be inhibited by drought, while higher amounts will increasingly suppress seedling emergence, especially of small-seeded species. 5 In addition to facilitation effects observed between living plants, dead plant remains may also exert positive effects on establishment. The sign of the litter effect on seedling emergence depends on soil humidity, with negative effects seen above a threshold amount, which is species-and family-specific and is closely related to seed size. Whether positive litter effects in grasslands are a consequence of coevolution remains to be examined.
Variation of DNA methylation is thought to play an important role for rapid adjustments of plant populations to dynamic environmental conditions, thus compensating for the relatively slow response time of genetic adaptations. However, genetic and epigenetic variation of wild plant populations has not yet been directly compared in fast changing environments. Here, we surveyed populations of Viola elatior from two adjacent habitat types along a successional gradient characterized by strong differences in light availability. Using amplified fragment length polymorphisms (AFLP) and methylation-sensitive amplification polymorphisms (MSAP) analyses, we found relatively low levels of genetic (H'gen = 0.19) and epigenetic (H'epi = 0.23) diversity and high genetic (ϕST = 0.72) and epigenetic (ϕST = 0.51) population differentiation. Diversity and differentiation were significantly correlated, suggesting that epigenetic variation partly depends on the same driving forces as genetic variation. Correlation-based genome scans detected comparable levels of genetic (17.0%) and epigenetic (14.2%) outlier markers associated with site specific light availability. However, as revealed by separate differentiation-based genome scans for AFLP, only few genetic markers seemed to be actually under positive selection (0-4.5%). Moreover, principal coordinates analyses and Mantel tests showed that overall epigenetic variation was more closely related to habitat conditions, indicating that environmentally induced methylation changes may lead to convergence of populations experiencing similar habitat conditions and thus may play a major role for the transient and/or heritable adjustment to changing environments. Additionally, using a new MSAP-scoring approach, we found that mainly the unmethylated (ϕST = 0.60) and CG-methylated states (ϕST = 0.46) of epiloci contributed to population differentiation and putative habitat-related adaptation, whereas CHG-hemimethylated states (ϕST = 0.21) only played a marginal role.
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