The reaction of trans-[PtCl(p-tol){P(p-tol)3}2] (PtCl) and H(C[triple chemical bond]C)2H (cat. CuI, HNEt2) gives PtC4H (82 %), which can be cross-coupled with excess HC[triple chemical bond]CSiEt3 (acetone, O2, CuCl/TMEDA; Hay conditions) to yield PtC6Si (77 %). The addition of nBu4N+F- in wet acetone gives PtC6H (84 %), and further addition of ClSiMe3 (F- scavenger) and excess HC[triple chemical bond]CSiEt3 (Hay conditions) yields PtC(8)Si (23 %). Similar cross-coupling reactions of PtCxH (generated in situ for x>6) and excess H(C[triple chemical bond]C)2SiEt3 give a) x=4, PtC8Si (29 %), PtC12Si (30 %), and PtC16Si (1 %); b) x=6, PtC10Si (59 %) and PtC14Si (7 %); c) x=8, PtC12Si (42 %); and d) x=10, PtC14Si (20 %). Hay homocoupling reactions of PtC4H, PtC6H, PtC8H, and PtC10H give PtC8Pt, PtC12Pt, PtC16Pt, and PtC20Pt (88-70 %), but PtC12H decomposes too rapidly. However, when PtC12Si and PtC14Si are subjected to Hay conditions, protodesilylation occurs in the presence of the oxidizing agent and PtC24Pt (36 %) and PtC28Pt (51 %) are isolated. Reactions of PtC6H and PtC10H with PtCl (CuI, HNEt2) give PtC6Pt (56 %) and PtC10Pt (84 %). The effect of the chain lengths in PtCxPt upon thermal stabilities (>200 degrees C for x< or =20), IR nu(C[triple chemical bond]C) patterns (progressively more bands), colors (yellow to orange to deep red), UV/Vis spectra (progressively red-shifted and more intense bands with epsilon>400,000 M(-1) cm(-1)), redox properties (progressively more difficult oxidations), and NMR spectra (many monotonic trends) are analyzed, including implications for the sp carbon allotrope carbyne. Whereas all other dodecaynes and tetradecaynes rapidly decompose at room temperature, PtC24Pt and PtC28Pt remain stable at >140 degrees C. Crystal structures of PtCxSi (x=6, 8, 10) and PtCxPt (x=6, 8, 10, 12) have been determined.
The Luria±Delbr uck mutation model has been mathematically formulated in a number of ways. This review article examines four most important formulations, focusing on important practical issues closely linked with the distribution of the number of mutants. These issues include the probability generating functions, moments (cumulants), computational methods and asymptotics. This review emphasizes basic principles which not only help to unify existing results but also allow for a few useful extensions. In addition, the review oers a historical perspective and some new explanations of divergent moments. Ó
Many of the regulatory processes occurring during plant embryogenesis are still unknown. Relatively few cells are involved, and they are embedded within maternal tissues, making this developmental phase difficult to study. Somatic embryogenesis is a more accessible system, and many important regulatory genes appear to function similar to zygotic development, making somatic embryogenesis a valuable model for the study of zygotic processes. To better understand the role of the Arabidopsis (Arabidopsis thaliana) MADS factor AGAMOUS-Like15 (AGL15) in the promotion of somatic embryogenesis, direct target genes were identified by chromatin immunoprecipitation-tiling arrays and expression arrays. One potential directly up-regulated target was At5g61590, which encodes a member of the ethylene response factor subfamily B-3 of APETALA2/ETHYLENE RESPONSE FACTOR transcription factors and is related to Medicago truncatula SOMATIC EMBRYO-RELATED FACTOR1 (MtSERF1), which has been shown to be required for somatic embryogenesis in M. truncatula. Here, we report confirmation that At5g61590 is a directly expressed target of AGL15 and that At5g61590 is essential for AGL15's promotion of somatic embryogenesis. Because At5g61590 is a member of the ETHYLENE RESPONSE FACTOR family, effects of ethylene on somatic embryogenesis were investigated. Precursors to ethylene stimulate somatic embryogenesis, whereas inhibitors of ethylene synthesis or perception reduce somatic embryogenesis. To extend findings to a crop plant, we investigated the effects of ethylene on somatic embryogenesis in soybean (Glycine max). Furthermore, we found that a potential ortholog of AGL15 in soybean (GmAGL15) upregulates ethylene biosynthesis and response, including direct regulation of soybean orthologs of At5g61590/MtSERF1 named here GmSERF1 and GmSERF2, in concordance with the M. truncatula nomenclature.
The past few years have seen a surge of novel applications of the Luria-Delbrück fluctuation assay protocol in bacterial research. Appropriate analysis of fluctuation assay data often requires computational methods that are unavailable in the popular web tool FALCOR. This paper introduces an R package named rSalvador to bring improvements to the field. The paper focuses on rSalvador’s capabilities to alleviate three kinds of problems found in recent investigations: (i) resorting to partial plating without properly accounting for the effects of partial plating; (ii) conducting attendant fitness assays without incorporating mutants’ relative fitness in subsequent data analysis; and (iii) comparing mutation rates using methods that are in general inapplicable to fluctuation assay data. In addition, the paper touches on rSalvador’s capabilities to estimate sample size and the difficulties related to parameter nonidentifiability.
The legume-rhizobial symbiosis results in the formation of root nodules that provide an ecological niche for nitrogen-fixing bacteria. However, plant-bacteria genotypic interactions can lead to wide variation in nitrogen fixation efficiency, and it is not uncommon that a bacterial strain forms functional (Fix + ) nodules on one plant genotype but nonfunctional (Fix − ) nodules on another. Host genetic control of this specificity is unknown. We herein report the cloning of the Medicago truncatula NFS1 gene that regulates the fixation-level incompatibility with the microsymbiont Sinorhizobium meliloti Rm41. We show that NFS1 encodes a nodulespecific cysteine-rich (NCR) peptide. In contrast to the known role of NCR peptides as effectors of endosymbionts' differentiation to nitrogen-fixing bacteroids, we demonstrate that specific NCRs control discrimination against incompatible microsymbionts. NFS1 provokes bacterial cell death and early nodule senescence in an allele-specific and rhizobial strain-specific manner, and its function is dependent on host genetic background.legumes | nodulation | nitrogen fixation specificity | symbiosis persistence | NCR peptides P lants of the legume family can supply their own nitrogen needs through symbioses with nitrogen-fixing soil bacteria called rhizobia. This symbiotic interaction commences when the host perceives rhizobial lipo-chitooligosaccharides known as nodulation (Nod) factors and initiates development of nodule primordia that become infected by the rhizobia (1). Infection of most legumes, including the model legume Medicago truncatula, starts in root hairs and involves formation of plant-made tubular structures known as infection threads (2). Infection threads direct bacteria to these primordia, where the rhizobia are released into the cytoplasm of host cells. During this process, the bacteria become surrounded by a host membrane, and these membrane compartments containing rhizobium are named symbiosomes. Subsequently, the rhizobia differentiate into nitrogen-fixing bacteroids (3).The legume-rhizobial symbiosis shows a high level of specificity, occurring at both species and genotypic levels (4, 5). Incompatible interactions at initial stages of the association can block bacterial infection and nodule organogenesis. This incompatibility can be caused by failed Nod factor or exopolysaccharide recognition (6-9) or by induced plant immune responses (9-11). Symbiotic incompatibility also takes place at later stages of nodule development, resulting in the formation of infected but nonfunctional nodules (12,13). This latter situation is well-documented in the Medicago-Sinorhizobium symbiosis, in which the bacteria undergo terminal differentiation (14). We previously screened a core collection of Medicago accessions using multiple Sinorhizobium meliloti strains, evaluating many host-strain combinations (13). In that experiment, ∼40% of the plant-strain combinations produced small, white infected nodules that were defective in nitrogen fixation (Fix − ) whereas only ∼2% resulte...
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