Cigar tobacco is an important economic crop that is widely grown around the world. In recent years, varietal identification has become a frequent problem in germplasm preservation collections, which causes considerable inconvenience and uncertainty in the cataloging and preservation of cigar germplasm resources, in the selection of parental lines for breeding, and in the promotion and use of high quality varieties. Therefore, the use of DNA fingerprints to achieve rapid and accurate identification of varieties can play an important role in germplasm identification and property rights disputes. In this study, we used genotyping-by-sequencing (GBS) on 113 cigar tobacco accessions to develop SNP markers. After filtering, 580,942 high-quality SNPs were obtained. We used the 580,942 SNPs to perform principal component analysis (PCA), population structure analysis, and neighbor joining (NJ) cluster analysis on the 113 cigar tobacco accessions. The results showed that the accessions were not completely classified based on their geographical origins, and the genetic backgrounds of these cigar resources are complex and diverse. We further selected from these high-quality SNPs to obtained 163 SNP sites, 133 of which were successfully converted into KASP markers. Finally, 47 core KASP markers and 24 candidate core markers were developed. Using the core markers, we performed variety identification and fingerprinting in 216 cigar germplasm accessions. The results of SNP fingerprinting, 2D barcoding, and genetic analysis of cigar tobacco germplasm in this study provide a scientific basis for screening and identifying high-quality cigar tobacco germplasm, mining important genes, and broadening the basis of cigar tobacco genetics and subsequent breeding work at the molecular level.
Long term tobacco planting leads to soil acidification. A ten-year experiment with various fertilization treatments (no fertilization (CK), chemical fertilizer (CF), organic-inorganic compound fertilizer (OCF), and organic fertilizer (OF)) was carried out between 2010 and 2020 in a continuous cropping system of Nicotiana tabacum in the brown soil of eastern China, to assess the effects of organic fertilizer on the improvement of tobacco planting soil acidification. The results indicated that treatments OCF and OF reduced the soil exchangeable acid content, of which the exchangeable aluminum showed the largest reduction by 51.28% with the OF treatment. In contrast, treatment CF showed more significant increases in exchangeable aluminum (Al)and Al saturation, and also apparently increased soil NO3−-N, NH4+-N and nitrification potential (NP) than other treatments. Treatments of OCF and OF significantly increased the total amount of exchangeable base (EBC) by 37.19% and 42.00% compared with CF, respectively. Redundancy analysis (RDA) showed that NP, NH4+-N, and NO3−-N were the important factors indicating soil acidification, while EBC and exchangeable K were the significant factors restricting soil acidification. Inevitably, OCF could improve the soil organic carbon pool and labile organic carbon pool. The structural equation model (SEM) showed that OCF treatment increased the soil organic carbon pool mainly by inhibiting soil nitrification and reducing the content of exchangeable Al. In conclusion, both OF and OCF treatments were effective methods to alleviate tobacco planting soil acidification, however OCF had more advantages in improving soil organic carbon pool.
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