Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project – and avert – future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups – including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems – http://www.predicts.org.uk). We make site-level summary data available alongside this article. The full database will be publicly available in 2015.

The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.

A primary goal of community ecologists is to understand the processes underlying the spatiotemporal patterns of species distribution. Understanding the dispersal process is of great interest in ecology because it is related to several mechanisms driving community structure. We investigated the mobility of dung beetles using mark-release-recapture technique, and tested the usefulness of the current recommendation for interaction distance between baited pitfall traps in the Brazilian Atlantic Forest. We found differences in mean movement rate between Scarabaeinae species, and between species with different sets of ecological traits. Large-diurnal-tunneler species showed greater mobility than did both large-nocturnal tunneler and roller species. Our results suggest that, based on the analyses of the whole community or the species with the highest number of recaptured individuals, the minimum distance of 50 m between pairs of baited pitfall traps proposed roughly 10 years ago is inadequate. Dung beetle species with different sets of ecological traits may differ in their dispersal ability, so we suggest a new minimum distance of 100 m between pairs of traps to minimize interference between baited pitfall traps for sampling copronecrophagous Scarabaeinae dung beetles.

AimWe aimed to test whether contributions of individual species (SCBD) and contributions of single sites (LCBD) to overall beta diversity can be predicted by species metrics and species characteristics and also by community metrics and ecological variables, respectively.LocationA mainland‐island landscape in the southern Brazilian Atlantic Forest domain.MethodsDung beetles were sampled along 100 sampling units within four large forest fragments. We partitioned beta diversity into SCBD and LCBD aiming to explore their relationships to species and site characteristics, respectively. We then used a combination of multivariate methods and beta regression analyses to examine patterns in SCBD and LCBD. The occupancy, total abundance, niche position, niche breadth and biological traits of species were used as predictor variables for SCBD values. Community metrics, environmental and spatial variables, and temporal patterns in the beta diversity components of turnover and nestedness were used as predictor variables for LCDB values.ResultsWe found that SCBD was strongly related to various species characteristics, such as occupancy, abundance and niche position, but was not related to biological traits of species and niche breadth. In particular, occupancy and its quadratic term showed a very strong unimodal relationship with SCBD, suggesting that intermediate species in terms of site occupancy contribute most to beta diversity. LCBD was mostly explained by variation in species richness, with a negative relationship being detected. Litter height and large‐scale spatial variables were also important in explaining variation in LCBD.Main conclusionsSCBD and LCBD were highly predictably related to species occupancy and species richness, respectively. Environmental conditions and large‐scale spatial variables also correlated with LCBD values. Understanding the determinants of SCBD and LCBD may thus hold a key to various general ecological, bioassessment and conservation issues. Protecting sites with high LCBD values may be a suitable approach to practical biodiversity conservation.

AimWe investigated changes in dung beetle β‐diversity components along a subtropical elevational gradient, to test whether turnover or nestedness‐related processes drive the dissimilarity of assemblages at spatial and temporal scales.LocationAn elevational gradient (200–1,600 m a.s.l.) of the Atlantic Forest in southern Brazil.MethodsWe investigated the extent to which β‐diversity varied along the elevational gradient (six elevations) at both spatial (among sites at different elevations) and temporal (different months at the same site) scales. We compared both the turnover and nestedness‐related dissimilarity of species and genera using multiple‐site or multiple‐month measures and tested whether these measurements were different from random expectations.ResultsA mid‐elevation peak in species richness along the elevational gradient was observed, and the lowest richness occurred at the highest elevations. We found two different groups of species, lowland and highland species, with a mixing of groups at intermediate elevations. The turnover component of β‐diversity was significantly higher for both spatial (i.e. elevational) and temporal changes in species composition. However, when the data for genera by site were considered, the elevational turnover value decreased in relative importance. Nestedness‐related processes are more important for temporal dissimilarity patterns at higher elevation sites.Main conclusionsSpatial and temporal turnover of dung beetle species is the most important component of β‐diversity along the elevational gradient. High‐elevation assemblages are not subsets of assemblages that inhabit lower elevations, but this relationship ceases when β‐diversity is measured at the generic level. Environmental changes across elevations may be the cause of the differential establishment of distinctive species, but these species typically belong to the same higher taxonomic rank. Conservation strategies should consider elevational gradients in case‐specific scenarios as they may contain distinct species assemblages in lowlands vs. highlands.

Understanding the ecological mechanisms driving beta diversity is a major goal of community ecology. Metacommunity theory brings new ways of thinking about the structure of local communities, including processes occurring at different spatial scales. In addition to new theories, new methods have been developed which allow the partitioning of individual and shared contributions of environmental and spatial effects, as well as identification of species and sites that have importance in the generation of beta diversity along ecological gradients. We analyzed the spatial distribution of dung beetle communities in areas of Atlantic Forest in a mainland-island scenario in southern Brazil, with the objective of identifying the mechanisms driving composition, abundance and biomass at three spatial scales (mainland-island, areas and sites). We sampled 20 sites across four large areas, two on the mainland and two on the island. The distribution of our sampling sites was hierarchical and areas are isolated. We used standardized protocols to assess environmental heterogeneity and sample dung beetles. We used spatial eigenfunctions analysis to generate the spatial patterns of sampling points. Environmental heterogeneity showed strong variation among sites and a mild increase with increasing spatial scale. The analysis of diversity partitioning showed an increase in beta diversity with increasing spatial scale. Variation partitioning based on environmental and spatial variables suggests that environmental heterogeneity is the most important driver of beta diversity at the local scale. The spatial effects were significant only at larger spatial scales. Our study presents a case where environmental heterogeneity seems to be the main factor structuring communities at smaller scales, while spatial effects are more important at larger scales. The increase in beta diversity that occurs at larger scales seems to be the result of limitation in species dispersal ability due to habitat fragmentation and the presence of geographical barriers.

We investigated the patterns of taxonomic (TD) and functional (FD) α and β‐diversities of ants in a mountainous landscape along three dimensions, namely one temporal (seasonal) and two spatial dimensions: between habitats – grassland and forest habitats (horizontal), and among elevation bands (vertical). In addition, we tested the effects of environmental variables (mean elevation and temperature, and normalised difference vegetation index – NDVI) on taxonomic and functional α‐ and β‐diversities. β diversities among the two spatial dimensions are the main components of TD. Conversely, FD is almost entirely composed by the α‐diversity component, with a very low contribution of β‐diversity. Regarding environmental drivers, the decrease in temperature caused by increased elevations and seasonal variations had a negative effect on taxonomic α‐diversity. There were no effects of environmental variables on ant functional α‐diversity. Despite the high turnover of ant species occurring along spatial dimensions, the communities were functionally redundant. The changes in species richness and composition patterns in this mountain were strongly influenced by variables correlated with elevation and habitat structure. Species composition changed across all dimensions, but the core traits and functions remained unchanged. Differences observed in the composition of ant communities over relatively short geographic distances highlight the importance to conserve the entire mountain, ensuring the maintenance of the ant diversity and associated ecosystem functions.

The millennial-scale evolutionary relationships between mammals and dung beetles have been eroded due to several drivers of contemporary biodiversity loss. Although some evidence of co-decline has been shown for mammals and dung beetles at some Neotropical sites, a biome-scale analysis for the entire Atlantic Forest of South America would strengthen our understanding of how relictual sets of mammal species can affect dung beetle co-occurrences and co-declines. We therefore collated hundreds of assemblages of both dung beetles and medium-to large-bodied mammals throughout the world's longest tropical forest latitudinal gradient to examine to what extent mammal assemblages may exert a positive influence on dung beetle species composition and functional assembly, and whether this relationship is scale dependent. We also collated several climatic and other environmental variables to examine the degree to which they shape mammal-dung beetle relationships. The relationships between local mammal and dung beetle faunas were examined using regression models, variation partitioning, dissimilarity indices and ecological networks. We found a clear positive relationship between mammal and dung beetle species richness across this forest biome, indicating an ongoing process of mammal-dung beetle niche-mediated co-decline. We found a strong relationship between the species composition of both taxa, in which dung beetle species dissimilarity apparently track changes in mammalian dissimilarity, typically in 80% of all cases. Co-variables such as phytomass and climatic variables also influenced mammal-dung beetle patterns of co-decline along the Atlantic Forest. We conclude that dung beetle diversity and community assembly are shaped by the remaining co-occurring mammal assemblages and their functional traits, and both groups were governed by environmental features. We emphasize that ecosystem-wide effects of mammal population declines remain poorly understood both quantitatively and qualitatively, and curbing large vertebrate defaunation will ensure the persistence of co-dependent species.