Background Late-life depression (LLD) is associated with poor social functioning. However, previous research uses bias-prone self-report scales to measure social functioning and a more objective measure is lacking. We tested a novel wearable device to measure speech that participants encounter as an indicator of social interaction. Methods Twenty nine participants with LLD and 29 age-matched controls wore a wrist-worn device continuously for seven days, which recorded their acoustic environment. Acoustic data were automatically analysed using deep learning models that had been developed and validated on an independent speech dataset. Total speech activity and the proportion of speech produced by the device wearer were both detected whilst maintaining participants' privacy. Participants underwent a neuropsychological test battery and clinical and self-report scales to measure severity of depression, general and social functioning. Results Compared to controls, participants with LLD showed poorer self-reported social and general functioning. Total speech activity was much lower for participants with LLD than controls, with no overlap between groups. The proportion of speech produced by the participants was smaller for LLD than controls. In LLD, both speech measures correlated with attention and psychomotor speed performance but not with depression severity or self-reported social functioning. Conclusions Using this device, LLD was associated with lower levels of speech than controls and speech activity was related to psychomotor retardation. We have demonstrated that speech activity measured by wearable technology differentiated LLD from controls with high precision and, in this study, provided an objective measure of an aspect of real-world social functioning in LLD.
This paper proposes a solution for events classification from a sole noisy mixture that consist of two major steps: a sound-event separation and a sound-event classification. The traditional complex nonnegative matrix factorization (CMF) is extended by cooperation with the optimal adaptive L1 sparsity to decompose a noisy single-channel mixture. The proposed adaptive L1 sparsity CMF algorithm encodes the spectra pattern and estimates the phase of the original signals in time-frequency representation. Their features enhance the temporal decomposition process efficiently. The support vector machine (SVM) based one versus one (OvsO) strategy was applied with a mean supervector to categorize the demixed sound into the matching sound-event class. The first step of the multi-class MSVM method is to segment the separated signal into blocks by sliding demixed signals, then encoding the three features of each block. Mel frequency cepstral coefficients, short-time energy, and short-time zero-crossing rate are learned with multi sound-event classes by the SVM based OvsO method. The mean supervector is encoded from the obtained features. The proposed method has been evaluated with both separation and classification scenarios using real-world single recorded signals and compared with the state-of-the-art separation method. Experimental results confirmed that the proposed method outperformed the state-of-the-art methods.
Background Between 2013 and 2015, the UK Biobank collected accelerometer traces from 103,712 volunteers aged between 40 and 69 years using wrist-worn triaxial accelerometers for 1 week. This data set has been used in the past to verify that individuals with chronic diseases exhibit reduced activity levels compared with healthy populations. However, the data set is likely to be noisy, as the devices were allocated to participants without a set of inclusion criteria, and the traces reflect free-living conditions. Objective This study aims to determine the extent to which accelerometer traces can be used to distinguish individuals with type 2 diabetes (T2D) from normoglycemic controls and to quantify their limitations. Methods Machine learning classifiers were trained using different feature sets to segregate individuals with T2D from normoglycemic individuals. Multiple criteria, based on a combination of self-assessment UK Biobank variables and primary care health records linked to UK Biobank participants, were used to identify 3103 individuals with T2D in this population. The remaining nondiabetic 19,852 participants were further scored on their physical activity impairment severity based on other conditions found in their primary care data, and those deemed likely physically impaired at the time were excluded. Physical activity features were first extracted from the raw accelerometer traces data set for each participant using an algorithm that extends the previously developed Biobank Accelerometry Analysis toolkit from Oxford University. These features were complemented by a selected collection of sociodemographic and lifestyle features available from UK Biobank. Results We tested 3 types of classifiers, with an area under the receiver operating characteristic curve (AUC) close to 0.86 (95% CI 0.85-0.87) for all 3 classifiers and F1 scores in the range of 0.80-0.82 for T2D-positive individuals and 0.73-0.74 for T2D-negative controls. Results obtained using nonphysically impaired controls were compared with highly physically impaired controls to test the hypothesis that nondiabetic conditions reduce classifier performance. Models built using a training set that included highly impaired controls with other conditions had worse performance (AUC 0.75-0.77; 95% CI 0.74-0.78; F1 scores in the range of 0.76-0.77 for T2D positives and 0.63-0.65 for controls). Conclusions Granular measures of free-living physical activity can be used to successfully train machine learning models that are able to discriminate between individuals with T2D and normoglycemic controls, although with limitations because of the intrinsic noise in the data sets. From a broader clinical perspective, these findings motivate further research into the use of physical activity traces as a means of screening individuals at risk of diabetes and for early detection, in conjunction with routinely used risk scores, provided that appropriate quality control is enforced on the data collection protocol.
BACKGROUND Between 2013 and 2015, the UK Biobank (UKBB) collected accelerometer traces (AXT) using wrist-worn triaxial accelerometers for 103,712 volunteers aged between 40 and 69, for one week each. This dataset has been used in the past to verify that individuals with chronic diseases exhibit reduced activity levels compared to healthy populations 1. Yet, the dataset is likely to be noisy, as the devices were allocated to participants without a specific set of inclusion criteria, and the traces reflect uncontrolled free-living conditions. OBJECTIVE To determine the extent to which AXT traces can distinguish individuals with Type-2 Diabetes (T2D) from normoglycaemic controls, and to quantify their limitations. METHODS Physical activity features were first extracted from the raw AXT dataset for each participant, using an algorithm that extends the previously developed Biobank Accelerometry Analysis toolkit from Oxford University 1. These features were complemented by a selected collection of socio-demographic and lifestyle (SDL) features available from UKBB. Clustering was used to determine whether activity features would naturally partition participants, and the SDL features were projected onto the resulting clusters for a more meaningful interpretation. Supervised machine learning classifiers were then trained using the different sets of features, to segregate T2D positive individuals from normoglycaemic. Multiple criteria, based on a combination of self-assessment Biobank variables and primary care health records linked to the participants in Biobank, were used to identify 3,103 individuals in this population who have T2D. The remaining non-diabetic participants were further scored on their physical activity impairment severity levels based on other conditions found in their primary care data, and those likely to have been physically impaired at the time were excluded. RESULTS Three types of classifiers were tested, with AUROC close to .86 for all three, and F1 scores in the range [.80,.82] for T2D positives and [.73,.74] for controls. Results obtained using non-physically impaired controls were compared to highly physically impaired controls, to test the hypothesis that non-diabetes conditions reduce classifier performance. Models built using a training set that includes controls with other conditions had worse performance: AUROC [.75-.77] and F1 in the range [.76-.77] (positives) and [.63,.65] (controls). Clusters generated using k-means and hierarchical methods showed limited quality (Silhouette scores: 0.105, 0.207 respectively), however a 2-dimensional visual rendering obtained using T-SNE reveals well-defined clusters. Importantly, one of the 3 hierarchical clusters contain almost exclusively (close to 100%) T2D participants. CONCLUSIONS The study demonstrates the potential, and limitations, of AXT in the UKBB when these are used to discriminate between T2D and normoglycaemic controls. The use of primary care EHRs is essential both to correctly identify positives, and also to identify controls that should be excluded to reduce noise in the training set.
This paper presents an approach for underdeter mined blind source separation in the case of additive Gaussian white noise and pink noise. Likewise, the proposed approach is applicable in the case of separating I + 3 sources from I mixtures with additive two kinds of noises. This situation is more challenging and suitable to practical real world problems. Moreover, unlike to some conventional approaches, the sparsity conditions are not imposed. Firstly, the mixing matrix is estimated based on an algorithm that combines short time Fourier transform and rough-fuzzy clustering. Then, the mixed signals are normalized and the source signals are recovered using modified Gradient descent Local Hierarchical Alternat ing Least Squares Algorithm exploiting the mixing matrix obtained from the previous step as an input and initialized by multiplicative algorithm for matrix factorization based on alpha divergence. The experiments and simulation resultsshow that the proposed approach can separate I + 3 source signals from I mixed signals, and it has superior evaluation performance compared to some conventional approaches.
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