A simulation/optimization (sfo) model is presented to address the increasingly common conflicts between wate~ quantity and quality objectives. The model can assist water * x denotes a particular stimuli y denotes an index for a nested-DO loop
Abstract. A simulation/optimization (S/0) model to aid managing multiobjective wastewater loading to streams while maintaining adequate downstream water quality is presented. The conflicting objectives are to maximize the human and dairy cattle populations from which treated wastewater can be discharged to the river system. Nonindustrial municipal (domestic) wastewater undergoes primary and secondary treatment by a sewage treatment plant (STP) before entering as a steady point source. Dairy wastewater is treated by overland flow (OLF) land treatment before entering the stream as a controlled steady diffuse source. Maximum dual-source loading strategies which do not degrade downstream water quality beyond specified limits are developed. For each computed loading strategy, an optimal OLF system design is also determined. The E constraint method is used to obtain sets of noninferior solutions. Sets of noninferior solutions are represented graphically to show the trade-off between human and bovine populations that can be maintained. Each set is computed for a different upstream flow rate to illustrate sensitivity to nondeterministic upstream flow rates. The nonlinear constraints utilized restrict downstream concentrations of 5-day biochemical oxygen demand, dissolved oxygen, nitrogen (organic, ammonia, nitrite, and nitrate), organic and dissolved phosphorus, and chlorophyll a. Concentrations are described via regression equations. The new regression expressions, surrogates for the complex advective-dispersive equation, permit rapid and feasible solutions by this unique S/0 model.
The mitochondrial DNA was isolated from wheat (Triticum aestivum) crop in combination of different centrifugation and density gradient ultracentrifugation, DNaseI enzyme treatment, sucrose sedimentation; lysis with SDS and potassium proteinase. Pure mitochondrial DNA was successfully obtained by phenol/chloroform/isoamyl alcohol extraction to remove protein, and digested with RNase phenol/chloroform extraction method. To detect mitochondrial DNA purity, specific primers were designed for nuclear (β-actin) and mitochondrial (COXII) gene. Isolated mitochondrial DNA is pure, suitable for PCR and genetic analysis.
ABSTRACT. We evaluated and compared 2 mitochondrial DNA (mtDNA) extraction methods in terms of DNA quality and success of subsequent polymerase chain reaction (PCR) amplifications from etiolated leaves of wheat crop (Triticum aestivum). mtDNA extraction is difficult because the presence of metabolites interfere with DNA isolation procedures and downstream applications such as DNA restriction, amplification, and cloning. The method (with modification) involved inactivation of genomic DNA by DNase I enzyme, RNA by RNase enzyme, contaminant proteins by using proteinase K, and precipitation of polysaccharides in the presence of a high salt concentration. The DNase I and RNA enzyme ratio was adjusted to 10:8 mL. The purity of mtDNA was confirmed by PCR amplification of genomic, mitochondrial, and chloroplast (rbcL) gene. The mitochondrial COXIII gene of 400 bp was amplified; the b-actin and chloroplast genes were not amplified. A 260 / A 280 (1.89) and A 260 /A 230 (2.07) ratios were calculated using a spectrophotometer. The isolated mtDNA was amenable to amplification and
ABSTRACT. Amplified fragment length polymorphism markers were used to assess genetic diversity in 10 male sterile wheat crop lines (hetero-cytoplasm with the same nucleus) in relation to a restorer wheat line. These male sterile lines were evaluated using 64 amplified fragment length polymorphism primer combinations, and 13 primers produced polymorphic bands, generating a total 682 fragments. Of the 682 fragments, 113 were polymorphic. The polymorphic information content and marker index values demonstrated the utility of the primer combinations used in the present study. Unweighted pair group method with arithmetic mean and principal coordinate analysis of the genotypic data revealed clustering of accessions based on genetic relationships, and accessions were separated into 2 groups with their restorer line. M. Ejaz et al. 8936©FUNPEC-RP www.funpecrp.com.br Genetics and Molecular Research 14 (3): 8935-8946 (2015) Jaccard's similarity coefficient values suggested good variability among the male sterile lines, indicating their utility in breeding programs. The fallouts of analysis of molecular variance showed large within-group population variation, accounting for 77% of variation, while amonggroup comparison accounted for 23% of the total molecular variation, which was statistically significant. The molecular diversity observed in this study will be useful for selecting appropriate accessions for plant improvement and hybridization through molecular-breeding approaches and for developing suitable conservation strategies.
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