The salmon-eating Southern Resident killer whales (Orcinus orca) of the north-eastern Pacific Ocean are listed as endangered both in the United States and Canada. Their critical habitat has been defined as the region of the inland waters of Washington State and British Columbia known as the Salish Sea, where they have traditionally spent much of their time from spring through fall. Using reports from experienced observers to sightings networks, we tracked the daily presence of the Southern Residents in these waters from 1 April to 30 June from 1994 through 2016. We found that the escapement estimates of spring Chinook salmon (Oncorhynchus tshawytscha) on the Fraser River in British Columbia were a significant predictor of the cumulative presence/absence of the whales throughout the spring season. There was also a difference in both whale presence and salmon abundance before and after 2005, suggesting that the crash in Chinook salmon numbers has fallen below threshold where it is worthwhile for the whales to spend as much time in the Salish Sea. The use of the Salish Sea by the Southern Residents has declined in the spring months as they are either foraging for Chinook salmon elsewhere or are shifting to another prey species. In order to continue providing necessary protections to this endangered species, critical habitat designations must be re-evaluated as this population of killer whales shifts its range in response to prey availability.

The inland waters of Washington State and southern British Columbia, collectively known as the Salish Sea, comprise key habitat for two regional populations of killer whales (Orcinus orca): the mammal-eating West Coast Transients and the endangered fish-eating Southern Residents. These two populations are genetically distinct and may avoid each other. Transient killer whale usage of the Salish Sea has been previously assessed over two seven-year time periods, showing an increase from 1987 to 2010. We documented a continued significant increase in mammal-eating killer whale presence in the Salish Sea from 2011 to 2017, with intra- and inter-annual variability and with record sightings in 2017. This continued increase, likely in response to abundant marine mammal prey, is related to both a growing population and an increase in the number of West Coast Transients visiting the area. Additionally, a negative binomial regression shows that absence of Southern Residents is correlated to transient presence. Finally, both populations of killer whales have been linked to regional harbor seal populations; harbor seals are salmonid-eating competitors of the Southern Residents and are prey for the mammal-eating transients. With Southern Residents listed as endangered, culling harbor seals has been proposed as a measure to help in their recovery. With this in mind, we developed an energetic model to assess the minimum number of harbor seals consumed by transient killer whales. Using the actual number of whales present in each age-sex class for each day of the year, we estimate that, at a minimum, transients in the Salish Sea consumed 1090 seals in 2017. This is more than 2% of the 2014 estimated harbor seal population the Salish Sea. The population controlling effects of transient killer whale predation on harbor seals should be considered when evaluating any pinniped management actions in the Salish Sea.

The fish-eating Southern Resident killer whales (Orcinus orca) of the northeastern Pacific are listed as Endangered in both the USA and Canada. The inland waters of Washington State and British Columbia, a region known as the Salish Sea, are designated as Southern Resident critical habitat by both countries. The whales have historically had regular monthly presence in the Salish Sea, with peak abundance occurring from May through September. In recent years, at least partially in response to shifting prey abundance, habitat usage by the Southern Residents has changed. As conservation measures aim to provide the best possible protection for the whales in their hopeful recovery, it is key that policies are based both on historic trends and current data. To this aim, our study shares 2018–2022 daily occurrence data to build upon and compare to previously published whale presence numbers and to demonstrate more recent habitat shifts. Based on reports from an extensive network of community scientists as well as online streaming hydrophones, every Southern Resident occurrence was confirmed either visually or acoustically. Documented here are the first-ever total absence of the Southern Residents in the Salish Sea in the months of May, June, and August, as well as their continued overall declining presence in the spring and summer, while fall and winter presence remains relatively high. It is key that management efforts consider these shifting presence patterns when setting both seasonal and regional protection measures aimed at supporting population recovery.

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The endangered Southern Resident killer whales (Orcinus orca) of the northeast Pacific region use two main types of vocal signals to communicate: discrete calls and whistles. Despite being one of the most-studied cetacean populations in the world, whistles have not been as heavily analyzed due to their relatively low occurrence compared to discrete calls. The aim of the current study is to further investigate the whistle repertoire and characteristics of the Southern Resident killer whale population. Acoustic data were collected between 2006–2007 and 2015–2017 in the waters around San Juan Island, Washington State, USA from boats and from shore. A total of 228 whistles were extracted and analyzed with 53.5% of them found to be stereotyped. Three of the four stereotyped whistles identified by a previous study using recordings from 1979–1982 were still occurring, demonstrating that whistles are stable vocalizations for a period of more than 35 years. The presence of three new stereotyped whistles was also documented. These results demonstrate that whistles share the longevity and vocal tradition of discrete calls, and warrant further study as a key element of Southern Resident killer whale communication and cultural transmission.