Enzymatic browning is a colour reaction occurring in plants, including cereals, fruit and horticultural crops, due to oxidation during postharvest processing and storage. This has a negative impact on the colour, flavour, nutritional properties and shelf life of food products. Browning is usually caused by polyphenol oxidases (PPOs), following cell damage caused by senescence, wounding and the attack of pests and pathogens. Several studies indicated that PPOs play a role in plant immunity, and emerging evidence suggested that PPOs might also be involved in other physiological processes. Genomic investigations ultimately led to the isolation of PPO homologs in several crops, which will be possibly characterized at the functional level in the near future. Here, focusing on the botanic families of Poaceae and Solanaceae, we provide an overview on available scientific literature on PPOs, resulting in useful information on biochemical, physiological and genetic aspects.

Information on the distribution of genetic variation is essential to preserve olive germplasm from erosion and to recover alleles lost through selective breeding. In addition, knowledge on population structure and genotype–phenotype associations is crucial to support modern olive breeding programs that must respond to new environmental conditions imposed by climate change and novel biotic/abiotic stressors. To further our understanding of genetic variation in the olive, we performed genotype-by-sequencing on a panel of 94 Italian olive cultivars. A reference-based and a reference-independent SNP calling pipeline generated 22,088 and 8,088 high-quality SNPs, respectively. Both datasets were used to model population structure via parametric and non parametric clustering. Although the two pipelines yielded a 3-fold difference in the number of SNPs, both described wide genetic variability among our study panel and allowed individuals to be grouped based on fruit weight and the geographical area of cultivation. Multidimensional scaling analysis on identity-by-state allele-sharing values as well as inference of population mixtures from genome-wide allele frequency data corroborated the clustering pattern we observed. These findings allowed us to formulate hypotheses about geographical relationships of Italian olive cultivars and to confirm known and uncover novel cases of synonymy.

BackgroundThe olive tree is a typical crop of the Mediterranean basin where it shows a wide diversity, accounting for more than 2,600 cultivars. The ability to discriminate olive cultivars and determine their genetic variability is pivotal for an optimal exploitation of olive genetic resources.MethodsWe investigated the genetic diversity within 128 olive accessions belonging to four countries in the Mediterranean Basin (Italy, Algeria, Syria, and Malta), with the purpose of better understanding the origin and spread of the olive genotypes across Mediterranean Basin countries. Eleven highly polymorphic simple sequence repeat (SSR) markers were used and proved to be very informative, producing a total of 179 alleles.ResultsCluster analysis distinguished three main groups according to their geographical origin, with the current sample of Maltese accessions included in the Italian group. Phylogenetic analysis further differentiated Italian and Maltese olive accessions, clarifying the intermediate position of Maltese accessions along the x/y-axes of principal coordinate analysis (PCoA). Model-based and neighbor clustering, PCoA, and migration analysis suggested the existence of two different gene pools (Algerian and Syrian) and that the genetic exchange occurred between the Syrian, Italian and Maltese populations.DiscussionThe close relationship between Syrian and Italian and Maltese olives was consistent with the historical domestication and migration of olive tree from the North Levant to eastern Mediterranean basin. This study lays the foundations for a better understanding of olive genetic diversity in the Mediterranean basin and represents a step toward an optimal conservation and exploitation of olive genetic resources.

The present work was aimed at assessing the genetic diversity of 42 local cultivars and oleaster genotypes from the area of Bejaia in Algeria. Fifteen highly polymorphic Simple Sequence Repeat markers were evaluated and proved to be very informative, producing a total number of 160 alleles with an average value of 10.7 per locus; the SSRs DCA09 and DCA16 were the most informative, distinguishing 17 and 19 genotypes, respectively. Phylogenetic and population structure analysis split the accessions in two main groups corresponding to most of oleasters and most of traditional varieties, respectively. Interestingly, ten traditional varieties resulted strictly related to the oleasters, indicating hybridization between the two botanical varieties. Genetic parameters and private alleles of groups confirmed this observation and indicated a wide genetic variability in Algerian olive germplasm. The results suggest the need to preserve and characterize this germplasm in order to limit the risk of losing potential important genetic traits present in the crop wild relatives

Algeria has several genetic resources on olive trees, mainly made up of small indigenous cultivars, and a very important wild heritage. Twenty olive samples including eight cultivars and twelve wild trees from the province of Bejaia (Algeria) are characterized, by combining molecular data (13 SSRs), fruit and pit morphological traits, fatty acids composition, and phenolic compounds of the extra virgin olive oils (EVOOs). The genetic results based on PCoA, UPGMA, and AMOVA analyses demonstrate that olive cultivars and wild trees are mixed, suggesting kinship relationships between cultivated and wild olive trees and even cases of synonymy between some cultivars. PCA analysis on morphological traits shows a good separation of the two olive botanical varieties, the wild olive trees producing smaller fruits than those of the cultivated ones. Significant differences are also found in terms of fatty acids and phenol compounds composition of the EVOOs. Wild olive oils show the highest contents on phenolic compounds, mainly oleocanthal, as well as a considerable richness on oleic acid. The comparison of pairwise distances between olive trees obtained by genetic, morphological, fatty acids and phenolic compounds contents data using Mantel's test indicates a significant correlation among morphological characteristics, DNA polymorphism, and phenolic compounds. The results obtained in the present work contribute to reveal the diversity existing in the cultivated and wild olive trees of the region of Bejaia, shedding some light on the importance of Algerian olives germplasm. Practical Applications: Cultivated and wild olive diversity are assessed by genetic, morphological, fatty acids and phenolic composition. SSR marker analysis demonstrates the presence of a high genetic variation between the analyzed samples. A significant correlation of morphological characteristics with DNA polymorphism and phenolic compounds is found. A significant diversity in the wild and cultivated olive trees is observed. Kinship relationships between wild and cultivated Algerian olive trees are demonstrated using SSR markers, while the morphological parameters allow a good distinction between the two taxa. Significant differences are found for fatty acids and phenol compounds composition for the EVOOs; the wild olive oils present an interesting composition compared to the cultivated form.