Conservation of Neotropical game species must take into account the livelihood and food security needs of local human populations. Hunting management decisions should therefore rely on abundance and distribution data that are as representative as possible of true population sizes and dynamics. We simultaneously applied a commonly used encounter-based method and an infrequently used sign-based method to estimate hunted vertebrate abundance in a 48,000-km2 indigenous landscape in southern Guyana. Diurnal direct encounter data collected during three years along 216, four-kilometer -long transects consistently under-detected many diurnal and nocturnal mammal species readily detected through sign. Of 32 species analyzed, 31 were detected by both methods; however, encounters did not detect one and under-detected another 12 of the most heavily hunted species relative to sign, while sign under-detected 12 never or rarely collected species relative to encounters. The six most important game animals in the region, all ungulates, were not encountered at 11–40% of village and control sites or on 29–72% of transects where they were detected by sign. Using the sign methodology, we find that tapirs, one of the terrestrial vertebrates considered most sensitive to overexploitation, are present at many sites where they were never visually detected during distance sampling. We find that this is true for many other species as well. These high rates of under-detection suggest that behavioral changes in hunted populations may affect apparent occurrence and abundance of these populations. Accumulation curves (detection of species on transects) were much steeper for sign for 12 of 16 hunted species than for encounters, but that pattern was reversed for 12 of 16 species unhunted in our area. We conclude that collection of sign data is an efficient and effective method of monitoring hunted vertebrate populations that complements encounter and camera-trapping methods in areas impacted by hunting. Sign surveys may be the most viable method for large-scale, management-oriented studies in remote areas, particularly those focused on community-based wildlife management.
Biodiversity affects many ecosystem functions and services, including carbon cycling and retention. While it is known that the efficiency of carbon capture and biomass production by ecological communities increases with species diversity, the role of vertebrate animals in the carbon cycle remains undocumented. Here, we use an extensive dataset collected in a high-diversity Amazonian system to parse out the relationship between animal and plant species richness, feeding interactions, tree biomass and carbon concentrations in soil. Mammal and tree species richness is positively related to tree biomass and carbon concentration in soil-and the relationship is mediated by organic remains produced by vertebrate feeding events. Our research advances knowledge of the links between biodiversity and carbon cycling and storage, supporting the view that whole community complexity-including vertebrate richness and trophic interactions-drives ecosystem function in tropical systems. Securing animal and plant diversity while protecting landscape integrity will contribute to soil nutrient content and carbon retention in the biosphere.
Unmanned aerial systems (UAS) are emerging as an accessible and versatile tool for ecologists, promising to revolutionize the way abundance and distribution data are obtained in wildlife studies. Establishment of UAS as an efficient and reliable tool demands understanding how detection errors influence UAS‐derived counts and possible solutions to address them. We describe two types of false‐negative errors (availability and perception errors) and two types of false‐positive errors (misidentification and double count) that may bias abundance estimates from UAS surveys. Then, we discuss available methods to address detection errors in UAS surveys and point out challenges for future developments. We present hierarchical models as an integrative framework to account for multiple detection errors and datasets in UAS abundance modelling. Methods to address detection errors in UAS surveys depend on how data are collected (flight plan, images processing, and reviewing procedure). Conventional aerial surveys literature offers a set of solutions, especially to deal with false‐negative errors. Available auxiliary information (such as ground counts and telemetry data) facilitates estimating detection errors, although the versatility of UAS permits exploring novel approaches. Solutions involve planning separated strip transects, temporally replicating flights, carrying out counts in orthomosaics, and multiple observer protocol. When automatic image review is used, subsample manual reviewing, trial experiments, and semiautomated procedures might deal with algorithm errors. UAS surveys need to be consciously planned, thinking on what kind of errors can significantly affect counts and the use of raw counts and indices should be avoided. Approaches that formally account for false positives are needed, particularly for double counts. Hierarchical modelling (especially N‐mixture models) offers a fruitful framework to explore and combine solutions, integrating multiple datasets and accommodating different detection errors.
Felids morphology and ecological role as hypercarnivores are quite constant, despite considerable body size variation among species. Skull morphological and functional features of 34 extant cat species were evaluated under a phylogenetic framework of the Felidae. Twenty skull measurements were analysed through Principal Component Analysis to assess the species morphofunctional spaces. Force indexes were obtained from static equilibrium equations to infer jaw mechanics. Correlations between morphological, functional, and ecological traits were tested by phylogenetically independent contrasts. In spite of the general cat-like pattern, specific features on the skulls allowed differentiation among groups. Acinonyx jubatus, for instance, showed a shorter and shallower temporal fossa than other big cats, and their bite functionality is marked by an increased contribution of the masseteric system. A morphofunctional dichotomy between Neotropical and Eurasian/African small cats was detected, and is associated with the major transversal axes of the skulls. According to the contrast analyses, the skull size is correlated with the bite force and prey size, but it is uncorrelated with the variations on jaw mechanics (from temporalis or masseter muscle optimizations). Also, there was no correlation between functional differences on jaw muscles and the ratio of prey weight to cat weight. The efficiency of the jaw apparatus among cats is quite consistent; therefore, the different evolutionary trends of jaw mechanics seem to be caused by the casuistic fixation of phenotypical variations, rather than by specific adaptative selections.
The sigmodontine South American rodent genus Oligoryzomys was first described as a subgenus of the genus Oryzomys to group together species distinguished by morphological measurements. To describe the dispersion patterns of this genus in South America, in this study, a total of 100 sequences were analyzed and compared with sequences of 9 Oligoryzomys species from GenBank. The sequences comprised 90 mitochondrial cytochrome b genes and 10 nuclear interphotoreceptor retinoid-binding protein genes, from 75 individuals of 7 species from 27 localities. Topologies of different phylogenetic trees revealed Oligoryzomys as a monophyletic genus containing 2 main species groups, one designated as the "Amazon-Cerrado" assemblage and the second as the "Pampa-Andean" clade. The north-to-south geographic pattern observed supports the hypothesis that the genus started from the northern Andes, occupied the Amazon and the Cerrado, and later inhabited the more southern regions of South America.
The density of Brazilian tapirs (Tapirus terrestris) was studied in the northeastern part of the Pantanal wetlands of Brazil using two simultaneous and independent methods: (1) systematic camera trapping combined with capture–recapture analysis, with camera traps spaced 1 km apart and distributed over 54 km2; and (2) line‐transect sampling using an array of 12 linear transects, from 3.8 to 7.2 km long, covering the principal open and forest habitat types across the entire 1063 km2 SESC Pantanal Reserve. The two methods yielded conservative density estimates of 0.58 ± 0.11 tapirs/km2 (camera trapping) and 0.55 (95% CI 0.30–1.01) tapirs/km2 (line transects). The study suggests that certain Pantanal habitats and sites can sustain relatively high population densities of tapirs when these animals are protected from hunting. Further testing of the camera‐trapping methodology as applied to tapirs is required, particularly focusing on extending the survey period. As it represents a relatively rapid method for estimating population density, in comparison to line‐transect surveys, and as it generates information simultaneously on multiple species that are conservation priorities, we recommend that camera‐trapping surveys be applied more widely across a variety of Pantanal habitats and land‐use categories in order to confirm the value of the vast 140,000 km2 wilderness region for this vulnerable species.
Xenarthrans—anteaters, sloths, and armadillos—have essential functions for ecosystem maintenance, such as insect control and nutrient cycling, playing key roles as ecosystem engineers. Because of habitat loss and fragmentation, hunting pressure, and conflicts with domestic dogs, these species have been threatened locally, regionally, or even across their full distribution ranges. The Neotropics harbor 21 species of armadillos, 10 anteaters, and 6 sloths. Our data set includes the families Chlamyphoridae (13), Dasypodidae (7), Myrmecophagidae (3), Bradypodidae (4), and Megalonychidae (2). We have no occurrence data on Dasypus pilosus (Dasypodidae). Regarding Cyclopedidae, until recently, only one species was recognized, but new genetic studies have revealed that the group is represented by seven species. In this data paper, we compiled a total of 42,528 records of 31 species, represented by occurrence and quantitative data, totaling 24,847 unique georeferenced records. The geographic range is from the southern United States, Mexico, and Caribbean countries at the northern portion of the Neotropics, to the austral distribution in Argentina, Paraguay, Chile, and Uruguay. Regarding anteaters, Myrmecophaga tridactyla has the most records (n = 5,941), and Cyclopes sp. have the fewest (n = 240). The armadillo species with the most data is Dasypus novemcinctus (n = 11,588), and the fewest data are recorded for Calyptophractus retusus (n = 33). With regard to sloth species, Bradypus variegatus has the most records (n = 962), and Bradypus pygmaeus has the fewest (n = 12). Our main objective with Neotropical Xenarthrans is to make occurrence and quantitative data available to facilitate more ecological research, particularly if we integrate the xenarthran data with other data sets of Neotropical Series that will become available very soon (i.e., Neotropical Carnivores, Neotropical Invasive Mammals, and Neotropical Hunters and Dogs). Therefore, studies on trophic cascades, hunting pressure, habitat loss, fragmentation effects, species invasion, and climate change effects will be possible with the Neotropical Xenarthrans data set. Please cite this data paper when using its data in publications. We also request that researchers and teachers inform us of how they are using these data.
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