BackgroundThe rising temperature of the world's oceans has become a major threat to coral reefs globally as the severity and frequency of mass coral bleaching and mortality events increase. In 2005, high ocean temperatures in the tropical Atlantic and Caribbean resulted in the most severe bleaching event ever recorded in the basin.Methodology/Principal FindingsSatellite-based tools provided warnings for coral reef managers and scientists, guiding both the timing and location of researchers' field observations as anomalously warm conditions developed and spread across the greater Caribbean region from June to October 2005. Field surveys of bleaching and mortality exceeded prior efforts in detail and extent, and provided a new standard for documenting the effects of bleaching and for testing nowcast and forecast products. Collaborators from 22 countries undertook the most comprehensive documentation of basin-scale bleaching to date and found that over 80% of corals bleached and over 40% died at many sites. The most severe bleaching coincided with waters nearest a western Atlantic warm pool that was centered off the northern end of the Lesser Antilles.Conclusions/SignificanceThermal stress during the 2005 event exceeded any observed from the Caribbean in the prior 20 years, and regionally-averaged temperatures were the warmest in over 150 years. Comparison of satellite data against field surveys demonstrated a significant predictive relationship between accumulated heat stress (measured using NOAA Coral Reef Watch's Degree Heating Weeks) and bleaching intensity. This severe, widespread bleaching and mortality will undoubtedly have long-term consequences for reef ecosystems and suggests a troubled future for tropical marine ecosystems under a warming climate.

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Coprolites are fossilized feces that can be used to provide information on the composition of the intestinal microbiota and, as we show, possibly on diet. We analyzed human coprolites from the Huecoid and Saladoid cultures from a settlement on Vieques Island, Puerto Rico. While more is known about the Saladoid culture, it is believed that both societies co-existed on this island approximately from 5 to 1170 AD. By extracting DNA from the coprolites, followed by metagenomic characterization, we show that both cultures can be distinguished from each other on the basis of their bacterial and fungal gut microbiomes. In addition, we show that parasite loads were heavy and also culturally distinct. Huecoid coprolites were characterized by maize and Basidiomycetes sequences, suggesting that these were important components of their diet. Saladoid coprolite samples harbored sequences associated with fish parasites, suggesting that raw fish was a substantial component of their diet. The present study shows that ancient DNA is not entirely degraded in humid, tropical environments, and that dietary and/or host genetic differences in ancient populations may be reflected in the composition of their gut microbiome. This further supports the hypothesis that the two ancient cultures studied were distinct, and that they retained distinct technological/cultural differences during an extended period of close proximity and peaceful co-existence. The two populations seemed to form the later-day Taínos, the Amerindians present at the point of Columbian contact. Importantly, our data suggest that paleomicrobiomics can be a powerful tool to assess cultural differences between ancient populations.

An epizootic of fibropapillomas in green turtles Chelonia mydas (Reptilia: Testudines: Cheloniidae) has occurred throughout the Caribbean since the mid‐1980s. Similar epizootics in Hawaii and Florida began 5 years earlier. All may be part of a panzootic. The 125 Caribbean cases greatly expand the known range of these epizootics. All the tumors we examined had spirorchiid (Digenea) eggs. Few turtles we examined with tumors were emaciated. Additional tumors quickly erupted in some captive turtles, whereas tumors of others remained unchanged for 1 year. The turtle leech Ozobranchus branchiatus (Hirudinea: Ozobranchidae) was associated with only three green turtles with fibropapillomas.

Summary Two coral cays near La Parguera, Puerto Rico, have large, exposed coral ramparts composed almost entirely of loose pieces of elkhorn coral Acropora palmata (88% of horizontal transects, 98% of vertical transects). The total volume of elkhorn coral in the ramparts of the two cays was estimated at 3600 and 12 800 m3. The present volume of living elkhorn coral on these two reefs was estimated at 7 and 14 m3 and previous volumes at 11 000 and 34 900 m3. White‐band disease was found on 8.5% of living elkhorn colonies. Lang’s boring sponge Cliona langae covered 10.8% of the total transect area, overgrowing both dead and living corals. White‐band disease and coral‐reef bleaching have drastically reduced the populations of elkhorn coral, thus, skeletal coral materials to replenish the plate ramparts are severely reduced, disrupting the process of forming and maintaining these coral reef ramparts. We predict that the next series of major storms striking these prominent cay ramparts will remove them. These disappearances will represent a quick, obvious and permanent consequence of global disturbances. Loss of cay ramparts will modify the environments on and around Atlantic coral reefs. Ramparts may be similarly lost from Indo‐Pacific reefs. The lack of any other indisputable definitive indicators of long‐term, major disturbances on coral reefs makes the distinct loss of coral‐reef ramparts an important physical sign.

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Different parasitic life strategies are described including four new life cycles: complex rebrooding, micro-male, mesoparasite and prey-predator transfer. Four new life cycle behaviours are named: nursery hiding, mid-moult stage, positive precursor (intraspecific antagonism) and negative precursor (ambush strategy). Further strategies discussed are opossum attack, double parasitism (doubling of the normal reproductive set), duplex arrangement (separated male-female pairs), simple rebrooding, and describing how displaced parasites and superinfections may partly elucidate life cycles. Proportional stunting masks life history effects of parasitism; cuckoo copepods are true parasites and not just associates; burrowing barnacles (acrothoracicans) are not parasites. Further findings based on life cycle information: branchiurans and pentastomes are possibly not related; firefly seed shrimp are not parasites; copepod pre-adult life cycle stages are common in the western pacific but rare in Caribbean; harpacticoids on vertebrates are not parasites; cuckoo copepods are true parasites; explained the importance of pennellid intermediate hosts. Crustacean parasite life cycles are largely unknown (1% of species). Most crustacean life cycles represent minor modifications from the ancestral freeliving mode. Crustacean parasites have less complex and less modified life cycles than other major parasite groups. This limits their exploitation of, and effectiveness, in parasitism. However, these life cycles will be an advantage in Global Change. Most metazoan parasites will be eliminated while crustaceans (and nematodes) will inherit the new world of parasites.