Due to the vital importance of resting cysts in the biology and ecology of many dinoflagellates, a transcriptomic investigation on Scrippsiella trochoidea was conducted with the aim to reveal the molecular processes and relevant functional genes regulating encystment and dormancy in dinoflagellates. We identified via RNA-seq 3,874 (out of 166,575) differentially expressed genes (DEGs) between resting cysts and vegetative cells; a pause of photosynthesis (confirmed via direct measurement of photosynthetic efficiency); an active catabolism including β-oxidation, glycolysis, glyoxylate pathway, and TCA in resting cysts (tested via measurements of respiration rate); 12 DEGs encoding meiotic recombination proteins and members of MEI2-like family potentially involved in sexual reproduction and encystment; elevated expressions in genes encoding enzymes responding to pathogens (chitin deacetylase) and ROS stress in cysts; and 134 unigenes specifically expressed in cysts. We paid particular attention to genes pertaining to phytohormone signaling and identified 4 key genes regulating abscisic acid (ABA) biosynthesis and catabolism, with further characterization based on their full-length cDNA obtained via RACE-PCR. The qPCR results demonstrated elevated biosynthesis and repressed catabolism of ABA during the courses of encystment and cyst dormancy, which was significantly enhanced by lower temperature (4 ± 1°C) and darkness. Direct measurements of ABA using UHPLC-MS/MS and ELISA in vegetative cells and cysts both fully supported qPCR results. These results collectively suggest a vital role of ABA in regulating encystment and maintenance of dormancy, akin to its function in seed dormancy of higher plants. Our results provided a critical advancement in understanding molecular processes in resting cysts of dinoflagellates.

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An all-organic memory device based on a copper phthalocyanine (CuPc) thin-film transistor (TFT) using gold nanocrystals embedded in a polyimide gate dielectric is demonstrated. Both the gate dielectric and the active semiconductor layer are organic materials. Discrete gold nanocrystals are adopted as the charge storage medium. Under proper gate bias, gold nanocrystals are charged and discharged, resulting in the modulation of the channel conductance. Current-voltage (I-V) measurements at room temperature show the memory behaviour of the fabricated devices. The detailed programming and erasing operations are discussed. Low fabrication temperature and low cost are two benefits of the fabricated memory devices, which could provide a low-cost solution for the all organic circuits.

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SUMMARYWe present two efficient methods of two-grid scheme for the approximation of two-dimensional semilinear reaction-diffusion equations using an expanded mixed finite element method. To linearize the discretized equations, we use two Newton iterations on the fine grid in our methods. Firstly, we solve an original non-linear problem on the coarse grid. Then we use twice Newton iterations on the fine grid in our first method, and while in second method we make a correction on the coarse grid between two Newton iterations on the fine grid. These two-grid ideas are from Xu's work (SIAM J. Sci. Comput. 1994; 15:231-237; SIAM J. Numer. Anal. 1996; 33:1759-1777) on standard finite element method. We extend the ideas to the mixed finite element method. Moreover, we obtain the error estimates for two algorithms of two-grid method. It is showed that coarse space can be extremely coarse and we achieve asymptotically optimal approximation as long as the mesh sizes satisfy H = O(h 1/4 ) in the first algorithm and H = O(h 1/6 ) in second algorithm.

Ships’ ballast tanks have long been known as vectors for the introduction of organisms. We applied next-generation sequencing to detect dinoflagellates (mainly as cysts) in 32 ballast tank sediments collected during 2001–2003 from ships entering the Great Lakes or Chesapeake Bay and subsequently archived. Seventy-three dinoflagellates were fully identified to species level by this metagenomic approach and single-cell polymerase chain reaction (PCR)-based sequencing, including 19 toxic species, 36 harmful algal bloom (HAB) forming species, 22 previously unreported as producing cysts, and 55 reported from ballast tank sediments for the first time (including 13 freshwater species), plus 545 operational taxonomic units (OTUs) not fully identified due to a lack of reference sequences, indicating tank sediments are repositories of many previously undocumented taxa. Analyses indicated great heterogeneity of species composition among samples from different sources. Light and scanning electron microscopy and single-cell PCR sequencing supported and confirmed results of the metagenomic approach. This study increases the number of fully identified dinoflagellate species from ballast tank sediments to 142 (> 50% increase). From the perspective of ballast water management, the high diversity and spatiotemporal heterogeneity of dinoflagellates in ballast tanks argues for continuing research and stringent adherence to procedures intended to prevent unintended introduction of non-indigenous toxic and HAB-forming species.

Abstract:The co-occurrence of cyanotoxins and taste-and-odor compounds are a growing concern for drinking water treatment plants (DWTPs) suffering cyanobacteria in water resources. The dissolved and cell-bound forms of three microcystin (MC) congeners (MC-LR, MC-RR and MC-YR) and four taste-and-odor compounds (geosmin, 2-methyl isoborneol, β-cyclocitral and β-ionone) were investigated monthly from August 2011 to July 2012 in the eastern drinking water source of Lake Chaohu. The total concentrations of microcystins and taste-and-odor compounds reached 8.86 µg/L and 250.7 ng/L, respectively. The seasonal trends of microcystins were not consistent with those of the taste-and-odor compounds, which were accompanied by dominant species Microcystis and Dolichospermum. The fate of the cyanobacteria and metabolites were determined simultaneously after the processes of coagulation/flocculation, sedimentation, filtration and chlorination in the associated full-scale DWTP. The dissolved fractions with elevated concentrations were detected after some steps and the breakthrough of cyanobacteria and metabolites were even observed in finished water. Chlorophyll-a limits at intake were established for the drinking water source based on our investigation of multiple metabolites, seasonal variations and their elimination rates in the DWTP. Not only microcystins but also taste-and-odor compounds should be taken into account to guide the management in source water and in DWTPs.Keywords: microcystins; taste-and-odor compounds; water source; drinking water treatment plant; cyanobacterial thresholds Key Contribution: The co-occurrence of microcystins and taste-and-odor compounds accompanied by dominant species Microcystis and Dolichospermum were studied in a drinking water source and in the associated full-scale DWTP. Not only microcystins but also taste-and-odor compounds were taken into account to guide the management in source water and in DWTPs.

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