BackgroundOysters are morphologically plastic and hence difficult subjects for taxonomic and evolutionary studies. It is long been suspected, based on the extraordinary species diversity observed, that Asia Pacific is the epicenter of oyster speciation. To understand the species diversity and its evolutionary history, we collected five Crassostrea species from Asia and sequenced their complete mitochondrial (mt) genomes in addition to two newly released Asian oysters (C. iredalei and Saccostrea mordax) for a comprehensive analysis.ResultsThe six Asian Crassostrea mt genomes ranged from 18,226 to 22,446 bp in size, and all coded for 39 genes (12 proteins, 2 rRNAs and 25 tRNAs) on the same strand. Their genomes contained a split of the rrnL gene and duplication of trnM, trnK and trnQ genes. They shared the same gene order that differed from an Atlantic sister species by as many as nine tRNA changes (6 transpositions and 3 duplications) and even differed significantly from S. mordax in protein-coding genes. Phylogenetic analysis indicates that the six Asian Crassostrea species emerged between 3 and 43 Myr ago, while the Atlantic species evolved 83 Myr ago.ConclusionsThe complete conservation of gene order in the six Asian Crassostrea species over 43 Myr is highly unusual given the remarkable rate of rearrangements in their sister species and other bivalves. It provides strong evidence for the recent speciation of the six Crassostrea species in Asia. It further indicates that changes in mt gene order may not be strictly a function of time but subject to other constraints that are presently not well understood.

The global gravity wave (GW) potential energy (PE) per unit mass is derived from SABER (Sounding of the Atmosphere using Broadband Emission Radiometry) temperature profiles over the past 14 years (2002–2015). Since the SABER data cover longer than one solar cycle, multivariate linear regression is applied to calculate the trend (means linear trend from 2002 to 2015) of global GW PE and the responses of global GW PE to solar activity, to QBO (quasi‐biennial oscillation) and to ENSO (El Niño–Southern Oscillation). We find a significant positive trend of GW PE at around 50°N during July from 2002 to 2015, in agreement with ground‐based radar observations at a similar latitude but from 1990 to 2010. Both the monthly and the deseasonalized trends of GW PE are significant near 50°S. Specifically, the deseasonalized trend of GW PE has a positive peak of 12–15% per decade at 40°S–50°S and below 60 km, which suggests that eddy diffusion is increasing in some places. A significant positive trend of GW PE near 50°S could be due to the strengthening of the polar stratospheric jets, as documented from Modern Era Retrospective‐analysis for Research and Applications wind data. The response of GW PE to solar activity is negative in the lower and middle latitudes. The response of GW PE to QBO (as indicated by 30 hPa zonal winds over the equator) is negative in the tropical upper stratosphere and extends to higher latitudes at higher altitudes. The response of GW PE to ENSO (as indicated by the Multivariate ENSO Index) is positive in the tropical upper stratosphere.

In this work, 11 years (2002)(2003)(2004)(2005)(2006)(2007)(2008)(2009)(2010)(2011)(2012) of Thermosphere, Ionosphere, Mesosphere Energetics, and Dynamics/Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) global temperature data are used to study the nonlinear interaction between stationary planetary waves (SPWs) and tides in the stratosphere and mesosphere. The holistic behavior of the nonlinear interactions between all SPWs and tides is analyzed from the point of view of energetics. The results indicate that the intensities of nonmigrating diurnal, semidiurnal, terdiurnal, and 6 h tides are strongest during winter and almost vanish during summer, synchronous with SPW activity. Temporal correlations between the SPWs and nonmigrating tides for these four tidal components are strong in the region poleward of 20°and below about 80 km. In the tropics, where the SPWs are very weak in all seasons, the correlations are small. Bispectral analysis between triads of waves and tides shows which particular interactions are likely to be responsible for the generation of the nonmigrating tides that are largest in the midlatitude stratosphere. Based on the more limited SABER observations at high latitudes, the correlations there are similar to those in midlatitudes during spring, summer, and autumn; there are no high-latitude observations by SABER in winter. These results show that nonlinear interactions between SPWs and tides in the stratosphere and the lower mesosphere may be an important source of the nonmigrating tides that then propagate into the upper mesosphere and lower thermosphere.

A 6 year (2007)(2008)(2009)(2010)(2011)(2012)(2013) temperature data set from the Solar Occultation for Ice Experiment (SOFIE) onboard the Aeronomy of Ice in the Mesosphere (AIM) satellite is used to extract gravity waves (GWs) in the polar stratosphere and mesosphere of both hemispheres. These data are continuous in the polar regions. The monthly mean GW potential energy (PE) increases exponentially with a scale height of~13 km in the upper stratosphere and mesosphere. GWs are stronger in the winter than in the summer and exhibit strong annual variation. GWs are stronger in the southern polar region (SPR) than in the northern polar region (NPR) except in the summer months. This is likely because there are stronger and longer-lasting zonal wind jets in the SPR stratosphere, as revealed from Modern-Era Retrospective analysis for Research and Applications (MERRA) wind data. The longitudinal variations of PE in the winter polar stratosphere are consistent with the elevated regions. In the mesosphere, the longitudinal variations of PE do not vary with height significantly. The correlations between GW PE and the column ice water content (IWC, an indicator of the polar mesosphere cloud) exhibit longitudinal and annual variations.

1] By using a compressible nonlinear two-dimensional gravity wave model, we simulate the nonlinear interactions between gravity waves (GWs) with three different vertical wavelengths and a meridional component of the diurnal tidal wind and temperature (30°N, September) calculated from GSWM-00. We also compare the results with the simulation of GWs propagation in a background with zero wind. Consistent with the dispersion relation, the numerical experiments show that tidal wind reduces the vertical wavelengths of the GWs when it is in the same direction as the wave propagation, and thus increases the perturbative shear and the likelihood of instability and wave breaking, especially for waves with shorter vertical wavelengths. The breaking of GWs below the critical level can increase the amplitude of diurnal tidal wind due to the momentum deposition. Because the GW penetration height increases with vertical wavelength, the amplitude of diurnal tidal wave at higher altitudes is more likely to be affected by GWs with large vertical wavelengths. Therefore gravity wave breaking not only accelerates the mean winds, but also increases the amplitudes of the diurnal tide at various altitudes.Citation: Liu, X., J. Xu, H.-L. Liu, and R. Ma (2008), Nonlinear interactions between gravity waves with different wavelengths and diurnal tide,

Abstract. An all-sky airglow imager (ASAI) was installed at Xinglong, in northern China (40.2 • N, 117.4 • E) in November 2009 to study the morphology of atmospheric gravity waves (AGWs) in the mesosphere and lower thermosphere (MLT) region. Using one year of OH airglow imager data from December 2009 to November 2010, the characteristics of short-period AGWs are investigated and a yearlong AGW climatology in northern China is first ever reported. AGW occurrence frequency in summer and winter is higher than that in equinoctial months. Observed bands mainly have horizontal wavelengths from 10 to 35 km, observed periods from 4 to 14 min and observed horizontal phase speeds in the range of 30 to 60 m s −1 . Most of the bands propagate in the meridional direction. The propagation directions of the bands show a strong southwestward preference in winter, while almost all bands propagate northeastward in summer. Although the wind filtering in the middle atmosphere may control AGW propagations in the zonal direction, the nonuniform distribution of wave sources in the lower atmosphere may contribute to the anisotropy in the meridional direction in different seasons. Additionally, as an indication of local instability, the characteristics of ripples are also analyzed. It also shows seasonal variations, occurring more often in summer and winter and mainly moving westward in summer and eastward in winter.

The seasonal and height dependencies of the orographic primary and larger‐scale secondary gravity waves (GWs) have been studied using the temperature profiles measured by Sounding of the Atmosphere using Broadband Emission Radiometry (SABER) from 2002 to 2017. At ~40°S and during Southern Hemisphere winter, there is a strong GW peak over the Andes mountains that extend to z ~ 55 km. Using wind and topographic data, we show that orographic GWs break above the peak height of the stratospheric jet. At z ~ 55–65 km, GW breaking and momentum deposition create body forces that generate larger‐scale secondary GWs; we show that these latter GWs form a wide peak above 65 km with a westward tilt. At middle latitudes during summer in the respective hemisphere, orographic GW breaking also generates larger‐scale secondary GWs that propagate to higher altitudes. Both orographic primary and larger‐scale secondary GWs are likely responsible for most of the non‐equatorial peaks of the persistent global distribution of GWs in SABER.

Abstract. We present a numerical study of a derivative nonlinear Schrödinger equation with a general power nonlinearity, |ψ| 2σ ψ x . In the L 2 -supercritical regime, σ > 1, our simulations indicate that there is a finite time singularity. We obtain a precise description of the local structure of the solution in terms of blowup rate and asymptotic profile, in a form similar to that of the nonlinear Schrödinger equation with supercritical power law nonlinearity.