Environmental DNA (eDNA) holds great promise for conservation applications like the monitoring of invasive or imperiled species, yet this emerging technique requires ongoing testing in order to determine the contexts over which it is effective. For example, little research to date has evaluated how seasonality of organism behavior or activity may influence detection probability of eDNA. We applied eDNA to survey for two highly imperiled species endemic to the upper Black Warrior River basin in Alabama, US: the Black Warrior Waterdog (Necturus alabamensis) and the Flattened Musk Turtle (Sternotherus depressus). Importantly, these species have contrasting patterns of seasonal activity, with N. alabamensis more active in the cool season (October-April) and S. depressus more active in the warm season (May-September). We surveyed sites historically occupied by these species across cool and warm seasons over two years with replicated eDNA water samples, which were analyzed in the laboratory using species-specific quantitative PCR (qPCR) assays. We then used occupancy estimation with detection probability modeling to evaluate both the effects of landscape attributes on organism presence and season of sampling on detection probability of eDNA. Importantly, we found that season strongly affected eDNA detection probability for both species, with N. alabamensis having higher eDNA detection probabilities during the cool season and S. depressus have higher eDNA detection probabilities during the warm season. These results illustrate the influence of organismal behavior or activity on eDNA detection in the environment and identify an important role for basic natural history in designing eDNA monitoring programs.
Modern zoos and aquariums aspire to contribute significantly to biodiversity conservation and research. For example, conservation research is a key accreditation criterion of the Association of Zoos and Aquariums (AZA). However, no studies to date have quantified this contribution. We assessed the research productivity of 228 AZA members using scientific publications indexed in the ISI Web of Science (WoS) database between 1993 and 2013 (inclusive). AZA members published 5175 peer-reviewed manuscripts over this period, with publication output increasing over time. Most publications were in the zoology and veterinary science subject areas, and articles classified as “biodiversity conservation” by WoS averaged 7% of total publications annually. From regression analyses, AZA organizations with larger financial assets generally published more, but research-affiliated mission statements were also associated with increased publication output. A strong publication record indicates expertise and expands scientific knowledge, enhancing organizational credibility. Institutions aspiring for higher research productivity likely require a dedicated research focus and adequate institutional support through research funding and staffing. We recommend future work build on our results by exploring links between zoo and aquarium research productivity and conservation outcomes or uptake.
Hypostomus macushi is described as a new species of the H. cochliodon group based on the presence of a light background with widely separated black spots. The only members of the H. cochliodon group with similar coloration are H. cochliodon, H.ericae, H. ericius and H. paucipunctatus. Hypostomus macushi can be separated from H. cochliodon by lacking a longitudinal ridge on the pterotic-supracleithrum and a lack of longitudinal dark stripes; from H. ericius by lacking keels formed from sharp odontodes on the lateral plates; from H. ericae and H. paucipunctatus by lacking a buccal papilla; from H. ericae by having spots in the distal dorsal and caudal fins not combining (vs. spots combining to form wavy lines); and from H. paucipunctatus by having medium to large spots (vs. very small spots). Hypostomus macushi is found in tributaries of the Essequibo and Negro Rivers of Guyana. The range of H. taphorni is additionally expanded to cover much of the Essequibo River basin in Guyana and a single locality in the Takutu River drainage. Addition of H. macushi and H. sculpodon to the phylogeny of the Hypostomus cochliodon group collapsed most of the clades found in a previous analysis. Only the H. cochliodon group, the wood-specializing species, and H. ericius + H. oculeus are supported as clades.Hypostomus macushi é descrito como uma nova espécie do grupo H. cochliodon baseado no padrão de coloração do corpo claro com pontos esparços. Os únicos membros deste grupo com pigmentação similar são H. cochliodon, H.ericae, H. ericius e H. paucipunctatus. H. macushi difere de H. cochliodon pela ausência da crista do pterótico-supracleitro e pela ausência de listras largas; e difere de H. ericius pela presença de quilhas pouco desenvolvidas com odontóides arredondados; de H. ericae e H. paucipunctatus pela ausência de papila bucal; de H. ericae por apresentar máculas na porcão distal dorsal e nadadeira caudal organizados aleatóriamente (vs. máculas arranjadas formando linhas onduladas); e de H. paucipunctatus por porssuir máculas de tamanho médio a grande (vs. máculas diminutas). H. macushi é encontrado nos tributários dos Rios Essequibo e Negro, na Guiana. A distribuição de H. taphorni é expandida para a maior parte da bacia do Rio Essequibo e em uma localidade na drenagem do Rio Takutu. A adição de H. macushi e H. sculpodon na filogenia do grupo H. cochliodon colapsou a maioria dos clados encontrados em um estudo anterior.
Meeting international commitments to protect 17% of terrestrial ecosystems worldwide will require >3 million square kilometers of new protected areas and strategies to create those areas in a way that respects local communities and land use. In 2000–2016, biological and social scientists worked to increase the protected proportion of Peru’s largest department via 14 interdisciplinary inventories covering >9 million hectares of this megadiverse corner of the Amazon basin. In each landscape, the strategy was the same: convene diverse partners, identify biological and sociocultural assets, document residents’ use of natural resources, and tailor the findings to the needs of decision-makers. Nine of the 14 landscapes have since been protected (5.7 million hectares of new protected areas), contributing to a quadrupling of conservation coverage in Loreto (from 6 to 23%). We outline the methods and enabling conditions most crucial for successfully applying similar campaigns elsewhere on Earth.
The Orinoco Andes and northwestern Guiana Shield (Essequibo, Orinoco, Branco, and upper Negro) were found to contain 11 species of Ancistrus, six of which are new. We additionally examine A. brevifilis from the Río Tuy of Venezuela and A. trinitatis from the island of Trinidad. The species in the region can be broken up into dorsoventrally flattened species (A. leoni new species, A. lithurgicus, and A. macropthalmus), white to yellow-dotted species (A. kellerae new species, A. nudiceps, and A. patronus new species), wide-jawed species (A. amaris new species and A. yutajae new species), and white-spotted species (A. brevifilis, A. leucostictus, A. trinitatis, A. saudades new species, and A. triradiatus). Distributions of Ancistrus support the Proto-Berbice hypothesis as A. saudades is found in the upper reaches of the Ventuari, Caura, and Caroni rivers, which were thought to have once flowed into the Proto-Berbice. In addition, although A. nudiceps does not appear to have split once the Takutu River was captured by the Branco, the progenitor of A. leucostictus and A. saudades did speciate with the populations on either side of the Rupununi Portal differing by 7% sequence divergence of the mitochondrial Cytochrome b gene. Besides the descriptions of the new species, we redescribe the others occurring in the area, and adjacent watersheds. We provide a key for their identification, and a preliminary hypothesis of relationships based on DNA sequences of the few species for which tissue samples are available.
The Guiana Shield in northeastern South America contains some of the largest tracts of intact forests on the globe. Guyana alone has more than 80% forest cover. In south-central Guyana a unique biogeographic feature allows for a hydrological connection between the Guiana Shield with the Amazon basin via the Rupununi savannas and wetlands (Rupununi Portal). This corridor allows for connectivity between two of the most biodiverse, carbon rich, and intact forests in the world. The significance of this (and other) hydrological corridors for terrestrial and aquatic species is underappreciated in the scientific literature. We attempt to determine the importance of the surrounding mosaic of habitats that influence fish assemblages in the Rupununi Portal. We extensively sampled fishes in this corridor over six expeditions. Multivariate analyses revealed significant trends in fish assemblage structure and environmental conditions. We found high species richness and diversity within the Takutu (Amazon River drainage) and Rupununi rivers (Essequibo River drainage). Fish assemblages were found to be most similar within the specific river drainages with some similarity within forest and savanna sites. A second Rupununi portal was revealed in the South Rupununi, at the upper Rupununi and Takutu Rivers. Ordination analyses found water body type, vegetation and water chemistry to be significantly structuring the fish assemblages of the Rupununi. Our study reveals the interdependent nature of the various habitats in the Rupununi that facilitate high biodiversity and maintain the ecosystem. With the increase in human activity in this region, and the increased connectivity of the region with the rest of the world through better roads, this area is in danger of being modified and fragmented to a point where ecosystem services begin to fail. We recommend demarcating a protected area in the region that considers the diversity of associated habitats and the importance of the ecological portal joining two diverse river basins.
A new species of Panaqolus is described from material from the Takutu River and the mainstem rio Branco. The new species is diagnosed from congeners by its color pattern consisting of dark and light bars on the body, bands on the fins, and with dots and vermiculations absent (vs. no bars in P. albomaculatus, P. nix, P. nocturnus, and P. koko, vs. fins unbanded in P. albomaculatus, P. dentex, P. koko, and P. nix, and vs. dots and vermiculations present in P. albivermis and P. maccus). The new species is diagnosed from barred species of Panaqolus by its specific bar number and orientation and color pattern on its head, with bars oriented in a anteroventral-posterodorsal direction (vs. anterodorsal-posteroventral bars in P. gnomus), having consistently 5 bars (n = 4) on the trunk that do not increase with size (vs. number increasing with size in P. purusiensis and vs. 6-12 in P. changae), and the color pattern on the head of straight lines extending from posterior to the eye to the snout margin, splitting in the middle portion of the line in larger specimens (vs. small, dense reticulate lines in P. changae). Biogeographically, we infer that the new species ancestrally originated in the Amazon river, dispersing to the Takutu River after the Amazon captured part of the Proto-Berbice. Uma espécie nova de Panaqolus é descrita do rio Branco e seu afluente, rio Tacutu. A nova espécie é diagnosticada de suas congêneres pelo padrão de colorido composto por barras escuras e claras alternadas no corpo e nadadeiras, não formando máculas ou vermiculações nas nadadeiras (vs. sem barras no corpo em P. albomaculatus, P. nix, P. nocturnus, e P. koko, e vs. sem barras nas nadadeiras em P. albomaculatus, P. dentex, P. koko, e P. nix, e vs. máculas e vermiculações presentes em P. albivermis e P. maccus). A nova espécie é diagnosticada das espécies de Panaqolus com barras pelo número e orientação das barras e pelo padrão de colorido cefálico, com as barras orientadas posterodorsalmente (vs. posteroventralmente em P. gnomus), pela presença de cinco barras (n = 4) no tronco que não aumentam com o tamanho (vs. número aumentando com o tamanho em P. purusiensis e vs. 6-12 barras em P. changae), e o padrão de colorido cefálico composto por linhas retas da margem posterior do olho à margem do focinho, dividida medianamente em indivíduos maiores (vs. linhas pequenas e vermiculadas em P. changae). Nos inferimos que a nova espécie originou-se ancestralmente no rio Amazonas, dispersando para o rio Tacutu após o Amazonas capturar parte do Proto-Berbice.
Hemiancistrus cerrado is described from the tributaries of rio Araguaia, rio Tocantins basin. Hemiancistrus cerrado has external similarities with H. megalopteryx and H. punctulatus from coastal streams of southern Brazil, and can be distinguished by having a larger internarial width, 15.9-21.1% of head length (vs. 11.2-14.0% in H. megalopteryx and 11.2-13.9% in H. punctulatus) and, with little overlap, by the larger adipose-fin spine length, 9.4-13.6% of standard length (vs. 7.1-8.7% in H. megalopteryx and 7.4-10.0% in H. punctulatus). Hemiancistrus cerrado further differs from H. megalopteryx by having the pectoral-fin spine reaching maximally to the middle of the pelvic-fin spine when adpressed in adult males (vs. reaching tip). Hemiancistrus cerrado differs from other members of Hemiancistrus by color and numerous morphometric and meristic data.Hemiancistrus cerrado é descrito de tributários da margem esquerda do rio Araguaia, bacia do rio Tocantins. Hemiancistrus cerrado possui similaridades externas com H. megalopteryx e H. punctulatus de drenagens costeiras do sul do Brasil, e pode ser separado das duas espécies pela maior distância entre as narinas, 15.9-21.1% do comprimento da cabeça (vs. 11.2-14.0% em H. megalopteryx e 11.2-13.9% em H. punctulatus), e, com alguma sobreposição, pela maior nadadeira adiposa, 9.4-13.6% do comprimento padrão (vs. 7.1-8.7% em H. megalopteryx e 7.4-10.0% em H. punctulatus); de H. megalopteryx ainda difere por espinho da nadadeira peitoral de machos adultos se estendendo até o meio do espinho da nadadeira pélvica quando adpressa (vs. se estendendo até a ponta do espinho). Hemiancistrus cerrado difere de outros congêneres pela coloração e diversos dados merísticos e morfométricos.
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