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[1] The biogeochemistry of continental shelf systems plays an important role in the global elemental cycling of nitrogen and carbon, but remains poorly quantified. We have developed a high-resolution physical-biological model for the U.S. east coast continental shelf and adjacent deep ocean that is nested within a basin-wide North Atlantic circulation model in order to estimate nitrogen fluxes in the shelf area of the Middle Atlantic Bight (MAB). Our biological model is a relatively simple representation of nitrogen cycling processes in the water column and organic matter remineralization at the water-sediment interface that explicitly accounts for sediment denitrification. Climatological and regionally integrated means of nitrate, ammonium, and surface chlorophyll are compared with its model equivalents and were found to agree within 1 standard deviation. We also present regional means of primary production and denitrification, and statistical measures of chlorophyll pattern variability. A nitrogen budget for the MAB shows that the sediment denitrification flux is quantitatively important in determining the availability of fixed nitrogen and shelf primary production (it was found to remove 90% of all the nitrogen entering the MAB). Extrapolation of nitrogen fluxes estimated for the MAB to the North Atlantic basin suggests that shelf denitrification removes 2.3 Â 10 12 mol N annually; this estimate exceeds estimates of N 2 fixation by up to an order of magnitude. Our results emphasize the importance of representing shelf processes in biogeochemical models.

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Techniques from dynamical systems theory have been applied to study horizontal stirring of fluid in the Philippine Archipelago. The authors' analysis is based on velocity fields produced by two high-resolution (3 and 6 km) numerical models. Particular attention is paid to identifying robust surface flow patterns and associating them with dominant Lagrangian coherent structures (LCSs). A recurrent wind-driven dipole in the lee of the coastline is considered in detail. The associated LCSs form a template for stirring, exchange, and biological transport in and around the dipole. Chaotic advection is argued to provide a relevant framework for interpreting mesoscale horizontal stirring processes in an archipelago as a whole. Implications for the formation of filaments, the production of tracer variance, and the scale at which stirring leads to mixing are discussed in connection with an observed temperature record.

Remote wind forcing from the tropical Pacific can also affect the sea level in the SCS via energy transmission through the Philippine archipelago, but its effect on the SEJ is small. The impact of the oceanic internal variability, such as eddy-current interaction, is assessed using an ocean general circulation model (OGCM). Such impact can lead to considerable year-to-year changes of sea level and the SEJ, equivalent to 20% of the observed variation. This implies the complexity and prediction difficulty of the upper ocean circulation in this region.