Amazonian waters are classified into three biogeochemical categories by dissolved nutrient content, sediment type, transparency, and acidity—all important predictors of autochthonous and allochthonous primary production (PP): (1) nutrient-poor, low-sediment, high-transparency, humic-stained, acidic blackwaters; (2) nutrient-poor, low-sediment, high-transparency, neutral clearwaters; (3) nutrient-rich, low-transparency, alluvial sediment-laden, neutral whitewaters. The classification, first proposed by Alfred Russel Wallace in 1853, is well supported but its effects on fish are poorly understood. To investigate how Amazonian fish community composition and species richness are influenced by water type, we conducted quantitative year-round sampling of floodplain lake and river-margin habitats at a locality where all three water types co-occur. We sampled 22,398 fish from 310 species. Community composition was influenced more by water type than habitat. Whitewater communities were distinct from those of blackwaters and clearwaters, with community structure correlated strongly to conductivity and turbidity. Mean per-sampling event species richness and biomass were significantly higher in nutrient-rich whitewater floodplain lakes than in oligotrophic blackwater and clearwater river-floodplain systems and light-limited whitewater rivers. Our study provides novel insights into the influences of biogeochemical water type and ecosystem productivity on Earth’s most diverse aquatic vertebrate fauna and highlights the importance of including multiple water types in conservation planning.

Riverine floodplains are biologically diverse and productive ecosystems. Although tropical floodplains remain relatively conserved and ecologically functional compared to those at higher latitudes, they face accelerated hydropower development, climate change, and deforestation. Alterations to the flood pulse could act synergistically with other drivers of change to promote profound ecological state change at a large spatial scale. State change occurs when an ecosystem reaches a critical threshold or tipping point, which leads to an alternative qualitative state for the ecosystem. Visualizing an alternative state for Amazonian floodplains is not straightforward. Yet, it is critical to recognize that changes to the flood pulse could push tropical floodplain ecosystems over a tipping point with cascading adverse effects on biodiversity and ecosystem services. We characterize the Amazonian flood pulse regime, summarize evidence of flood pulse change, assess potential ecological repercussions, and provide a monitoring framework for tracking flood pulse change and detecting biotic responses.

A new species of Bryconops is described from the rio Maicuru, a tributary of the left margin of the lower Amazon River, Pará, Brazil. Bryconops chernoffi new species, differs from all its congeners by the presence of an elongated dark patch of pigmentation immediately after the posterodorsal margin of the opercle, running vertically from the supracleithrum to the distal margin of the cleithrum (vs. absence of a similar blotch), and by a dark dorsal fin with a narrow hyaline band at middle portion of dorsal-fin rays (vs. dorsal fin hyaline or with few scattered chromatophores). It differs further from all its congeners, except B. colanegra, by the presence of a blurred black stripe at the anal fin base. It differs from B. colanegra by possessing fewer predorsal scales (8–9 vs. 10–11) and in that the third infraorbital contacts the preopercle ventrally (vs. third infraorbital not contacting preopercle ventrally). The new species is assigned to the subgenus Creatochanes by the number of maxillary teeth, and ossification and denticulation of the gill rakers.

The geographic distribution of a catfish of the family Loricariidae, Rineloricaria daraha Rapp Py-Daniel and Fichberg, 2008, which was only known from its type locality within the Rio Daraá, Brazil, is extended here within the Rio Negro basin to Colombia. This new record from Colombian territory is more than 700 km apart, in hydrological distance, from previously recorded locality in the Rio Daraá. Illustrations of diagnostic characters and morphometrics are provided based on Colombian specimens.

The Amazon River basin hosts the most diverse freshwater ichthyofauna in the world, and yet huge areas of the basin remain unexplored. This is the case for the upper tributaries of the rio Negro, especially those draining the Colombian territory. Here we present a list of 224 species derived from the examination of specimens collected in the Mitú region (Vaupés Department, Colombia), the middle basin of the río Vaupés. Of the species identified in our study, 10 species are recorded from Colombia for the first time, and 26 species are newly recorded from the Colombian Amazon. The number of species we present here comprise almost one-third of the known species diversity of the Colombian Amazon and nearly a tenth of the total number of those known across the entirety of the Amazon basin. The most diverse orders were Characiformes (120 species) and Siluriformes (65 species), and the remaining six orders comprised less than 20% of total species. The study area comprised blackwater systems, which are considered to be nutrient-poor environments. We discuss some ecological aspects that might explain how this highly diverse ichthyofauna originates and is maintain in less productive systems. The list presented here adds an important number of new records and complements the information derived from previous studies, carried out thus far with regards to the fish fauna of the Colombian Amazon.