No abstract

Clubroot is a disease of cruciferous crops that causes significant economic losses to vegetable production worldwide. We applied high-throughput amplicon sequencing technology to quantify the effect of Trichodermaharzianum LTR-2 inoculation on the rhizosphere community of Chinese cabbage (Brassica rapa subsp. pekinensis cv. Jiaozhou) in a commercial production area. T. harzianum inoculation of cabbage reduced the incidence of clubroot disease by 45.4% (p < 0.05). The disease control efficacy (PDIDS) was 63%. This reduction in disease incidence and severity coincided with a drastic reduction in both the relative abundance of Plasmodiaphora brassicae, the causative pathogen of cabbage clubroot disease, and its copy number in rhizosphere soil. Pathogenic fungi Alternaria and Fusarium were also negatively associated with Trichoderma inoculation according to co-occurrence network analysis. Inoculation drastically reduced the relative abundance of the dominant bacterial genera Delftia and Pseudomonas, whilst increasing others including Bacillus. Our results demonstrate that T. harzianum LTR-2 is an effective biological control agent for cabbage clubroot, which acts through modulation of the soil and rhizosphere microbial community.

Intensifying livestock production by integrating perennial forages has great potential to contribute to sustainable development and livelihoods in the Mekong region. However, the approach taken must be informed by the environmental, social, and cultural context of the region. Accordingly, we review published research papers and reports from relevant research for development projects to identify options for sustainably integrating forages into farming systems, with a focus on sand-dominant soils of southern Laos and Cambodia. First, we examine existing livestock management practices to determine the compatibility of forages as an option to intensify livestock production. Second, we review the environmental properties of rainfed lowland rice systems with sandy soils and their implications for forage growing. Third, we identify and compare the suitability of existing forage genetics that is adapted to these environmental properties. Fourth, we propose adapted varieties, outline appropriate management options, and discuss the sustainable engagement of smallholders in the production of forages. The key findings are as follows: (1) Forages appear compatible with the sociocultural properties of smallholder farming systems in southern Laos and Cambodia because there is an awareness of existing limitations to livestock production, widespread desire to possess livestock for cultural reasons, and mounting pressure to improve the productivity of grazing areas and the efficiency of labor.(2) The limiting properties of the environment are drought, soil acidity, flooding, and soil infertility, which must be addressed in the selection and management of forage genetics. (3) Broadly adapted perennial tropical grasses and herbaceous legumes exist, but these are unlikely to thrive in lowland ecosystems of southern Laos and Cambodia that are prone to both annual flooding and drought. (4) Variations in surface hydrology at the farm scale often result in differentiated environments suitable for differing varieties. Brachiaria sp. hybrid "Mulato II," Panicum maximum, and Stylosanthes guianensis are recommended for droughtprone, acidic sands that are safe from prolonged submergence and would require the least additional management, whilst Paspalum atratum is recommended for low-lying areas with access to irrigation. (5) The transition to perennial forage integration appears to be accessible to farmers and can allow them to rapidly accumulate benefits in terms of saved labor; however, efforts to intensify animal production have been slow and must contend with multiple challenges: poor understanding of animal husbandry and health, cultural views relating to the role of animals in production systems, and poor access to forage and livestock services. These must all be addressed if sustainably intensified animal production is to be achieved in these and similar regions.

Understanding how the vulnerability of agricultural production to climate change can differ spatially has practical significance to sustainable management of agricultural systems worldwide. Accordingly, this study developed a conceptual framework to assess the agricultural vulnerability of 243 rural counties on the Chinese Loess Plateau. Indicators representing the climate/agriculture interface were selected to describe exposure and sensitivity, while stocks of certain capitals were used to describe adaptive capacity. A vulnerability index for each county was calculated and the spatial distribution was mapped. Results showed that exposure, sensitivity, and adaptive capacity occur independently, with most contributing indicator values concentrated in a narrow range after normalization. Within the 49 most vulnerable counties, which together encompass 81 % of the vulnerability index range, 42 were characterized by high exposure and sensitivity but low adaptive capacity. The most vulnerable area was found to be located in the central northeast-southwest belt of Loess Plateau. Adaptation measures for both ecological restoration and economic development are needed and potential adaptation options need further investigation.

This study reports the effects of a long-term tillage and crop residue experiment on the soil microbial ecology of a Loess soil located in Gansu Province, western China. Tillage and residue management treatments were imposed on a nine-year continuous rotation of maize (Zea mays L. cv Zhongdan No. 2), winter wheat (Triticum aestivum L. cv Xifeng No. 24) and soybean (Glycine max L. cv Fengshou No. 12). After nine years, there were significant effects on topsoil (0-10 cm) carbon, nitrogen, microbial activity, microbial composition and function. The retention of crop residues compared to residue removal significantly improved all measures of chemical and biological soil fertility. The values of average well color development (AWCD), a measure of the metabolic utilization of organic compounds, for the residue retention treatments were always higher than those with residue removal treatments, and the differences increased with increasing incubation time. Principal component analysis indicated that crop residue retention significantly altered topsoil microbial activity and community functional diversity. Our research clearly demonstrates that retention of crop residues significantly enhances soil microbial metabolic capacity, compared to no tillage, and can therefore contribute to sustainable agriculture on the Loess Plateau. Promotion of conservation agriculture has the potential to rehabilitate soil fertility and improve agricultural sustainability and food security on the region.

Burkholderia vietnamiensis B418 is a multifunctional plant growth-promoting rhizobacteria (PGPR) strain with nitrogen-fixing and phosphate-solubilizing capability which can be employed for root-knot nematode (RKN) management on various crops and vegetables. Here we investigated the control efficacy of B. vietnamiensis B418 inoculation against RKN on watermelon, applied either alone or combined with nematicides fosthiazate or avermectin, and their effects on bacterial and fungal microbiomes in rhizosphere soil. The results of field experiments showed individual application of B418 displayed the highest control efficacy against RKN by 71.15%. The combinations with fosthiazate and avermectin exhibited slight incompatibility with lower inhibitory effects of 62.71% and 67.87%, respectively, which were still notably higher than these nematicides applied separately. Analysis of microbiome assemblages revealed B418 inoculation resulted in a slight reduction for bacterial community and a significant increment for fungal community, suggesting that B418 could compete with other bacteria and stimulate fungal diversity in rhizosphere. The relative abundance of Xanthomonadales, Gemmatimonadales and Sphingomonadales increased while that of Actinomycetales reduced with B418 inoculation. The predominate Sordariomycetes of fungal community decreased dramatically in control treatment with B418 inoculation whereas there were increments in fosthiazate and avermectin treatments. Additionally, nitrogen (N) cycling by soil microbes was estimated by quantifying the abundance of microbial functional genes involved in N-transformation processes as B418 has the capability of N-fixation. The copy number of N-fixing gene nifH increased with B418 inoculation, and the highest increment reached 35.66% in control treatment. Our results demonstrate that B. vietnamiensis B418 is an effective biological nematicide for nematode management, which acts through the modulation of rhizosphere microbial community.

No abstract

Fusarium crown rot and wheat sharp eyespot are major soil-borne diseases of wheat, causing serious losses to wheat yield in China. We applied high-throughput sequencing combined with qPCR to determine the effect of winter wheat seed dressing, with either Trichoderma atroviride HB20111 spore suspension or a chemical fungicide consisting of 6% tebuconazole, on the fungal community composition and absolute content of pathogens Fusarium pseudograminearum and Rhizoctonia cerealis in the rhizosphere at 180 days after planting. The results showed that the Trichoderma and chemical fungicide significantly reduced the amount of F. pseudograminearum in the rhizosphere soil (p < 0.05), and also changed the composition and structure of the fungal community. In addition, field disease investigation and yield measurement showed that T. atroviride HB20111 treatment reduced the whiteheads with an average control effect of 60.1%, 14.9% higher than the chemical treatment; T. atroviride HB20111 increased yield by 7.7%, which was slightly more than the chemical treatment. Therefore, T. atroviride HB20111 was found to have the potential to replace chemical fungicides to control an extended range of soil-borne diseases of wheat and to improve wheat yield.