Breeding for drought tolerance is a challenging task that requires costly, extensive, and precise phenotyping. Genomic selection (GS) can be used to maximize selection efficiency and the genetic gains in maize (Zea mays L.) breeding programs for drought tolerance. Here, we evaluated the accuracy of genomic selection (GS) using additive (A) and additive + dominance (AD) models to predict the performance of untested maize single-cross hybrids for drought tolerance in multi-environment trials. Phenotypic data of five drought tolerance traits were measured in 308 hybrids along eight trials under water-stressed (WS) and well-watered (WW) conditions over two years and two locations in Brazil. Hybrids' genotypes were inferred based on their parents' genotypes (inbred lines) using single-nucleotide polymorphism markers obtained via genotyping-by-sequencing. GS analyses were performed using genomic best linear unbiased prediction by fitting a factor analytic (FA) multiplicative mixed model. Two cross-validation (CV) schemes were tested: CV1 and CV2. The FA framework allowed for investigating the stability of additive and dominance effects across environments, as well as the additive-by-environment and the dominance-by-environment interactions, with interesting applications for parental and hybrid selection. Results showed differences in the predictive accuracy between A and AD models, using both CV1 and CV2, for the five traits in both water conditions. For grain yield (GY) under WS and using CV1, the AD model doubled the predictive accuracy in comparison to the A model. Through CV2, GS models benefit from borrowing information of correlated trials, resulting in an increase of 40% and 9% in the predictive accuracy of GY under WS for A and AD models, respectively. These results highlight the importance of multi-environment trial analyses using GS models that incorporate additive and dominance effects for genomic predictions of GY under drought in maize single-cross hybrids.
Wheat blast, caused by Pyricularia oryzae Triticum (PoT) lineage, is a major constraint to wheat production, mainly in the tropics of Brazil where severe epidemics are more frequent. We analyzed disease and wheat yield data from 42 uniform field trials conducted during nine years (2012 to 2020) in order to assess whether the percent control and yield response were influenced by fungicide type, region (tropical or subtropical), and year. Six treatments were selected, all evaluated in at least 19 trials. Two fungicides were applied as solo active ingredients: MANCozeb, and TEBUconazole, and four were premixes: AZOXystrobin + TEBU, TriFLoXystrobin + PROThioconazole, TFLX + TEBU, and PYRAclostrobin + EPOXiconazole. Percent control, calculated from back-transforming estimates by a meta-analysis network model fitted to the log of the means, ranged from 43% to 58%, with all but PYRA + EPOX showing efficacy greater than 52% on average, not differing among them. The variation in both efficacy and yield response was explained by region and all but TEBU performed better in the subtropics than in the tropics. Yield response from using three sequential sprays was around two times greater in the subtropics (319 to 532 kg/ha) than in the tropics (149 to 241.3 kg/ha). No significant decline in fungicide efficacy or yield response was observed in nine years of study for any of the fungicides. Our results reinforce the need to improve control by adopting an integrated management approach in the tropics given the poorer performance and lower profitability, especially for the premixes, than in the subtropics.
-It is questionable if early selection for resistance to ; in F 3:6, 196 treatments (64 A, 64 B, 64 C and 4 T); in F 3:7, 81 treatments (26 A, 26 B, 26 C and 3 T)
Large‐scale genotypic information can be used to increase genetic gain in plant breeding programmes. In this research, we evaluated the following: (i) statistical models that could be useful in selection of superior tobacco genotypes in absence of phenotypic information; (ii) the applicability of genome‐wide selection (GWS) for predicting tobacco hybrid performance, and (iii) correlations between genetic divergence of parental lines and F1 hybrid performance. We crossed 13 inbred lines of flue‐cured Virginia tobacco crossed in a diallel scheme to generate 72 hybrid combinations and evaluated them in two field environments. Genotype by sequencing was used for single nucleotide polymorphism (SNP) marker generation, and prediction model validation was performed with different levels of missing information. Hybrid performance was predicted using only the genotypic and phenotypic information. We found genetic divergence among lines to be uncorrelated with hybrid performance or heterosis. Genotype × environment interaction affects GWS efficiency, however, and an index that incorporates both genotypic and phenotypic information improves selection accuracy. Tobacco hybrid prediction utilizing GWS data can be used as additional information to increase the response to selection.
ABSTRACT. The objective of this study was to evaluate the performance of 119 full sib progenies of the fifth cycle of reciprocal recurrent selection (RRS) derived from of Universidade Federal de Lavras maize breeding program. The experiment was carried out in an 11 x 11 triple lattice design at two locations (Lavras, Lambari). The plots consisted of two rows of 3 m, with four plants per 1 m and 0.60 meters of spacing between lines. The grain yield was obtained as kg/plot through weighing of husked ears. The contrast between progenies and controls was not significant, indicating there were no significant differences among the average grain yields of the progenies and controls. When considering the joint analysis, heritability was 64.2%; however, this estimate did not differ from the values estimated for each location separately. Estimates of genetic and phenotypic variance among progenies ranged from 0.21 to 0.28 and 0.30 to 0.47, respectively. Estimates of selection gain, for 10% selection intensity, indicated gains of 16% in the joint analysis of the two locations. The progenies of the fifth cycle of RRS had high average grain yield, associated with high variability. In comparison to the average grain yields exhibited by the controls, it was concluded that the progenies have the potential to be commercially exploited.
This study estimated the general and specific combining abilities and mean heterosis of tobacco lines of the varietal groups Flue-Cured Virginia (FCV) and Air-Cured Burley (BY). In addition, possible advantages and an improved strategy of using hybrids in tobacco breeding in the tropics were discussed. Ten BY and 13 FCV lines were crossed in a diallel mating design. The hybrids and parental lines were evaluated at two locations in Southern Brazil. The mean heterosis was 5.37% for FCV and zero for BY lines, although higher than 15% in some combinations. The occurrence of heterosis indicates dominance in the control of tobacco yield. Tobacco breeding programs must focus primarily on improving the performance of lines per se and then on the identification of the best hybrid by testing combinations.
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