Eating disorders and substance use disorders frequently co-occur. Twin studies reveal shared genetic variance between liabilities to eating disorders and substance use, with the strongest associations between symptoms of bulimia nervosa (BN) and problem alcohol use (genetic correlation [r g ], twin-based=0.23-0.53). We estimated the genetic correlation between eating disorder and substance use and disorder phenotypes using data from genome-wide association studies (GWAS). Four eating disorder phenotypes (anorexia nervosa [AN], AN with binge-eating, AN without binge-eating, and a BN factor score), and eight substance-use-related phenotypes (drinks per week, alcohol use disorder [AUD], smoking initiation, current smoking, cigarettes per day, nicotine dependence, cannabis initiation, and cannabis use disorder) from eight studies were included. Significant genetic correlations were adjusted for variants associated with major depressive disorder (MDD). Total sample sizes per phenotype ranged from ~2,400 to ~537,000 individuals. We used linkage disequilibrium score regression to calculate single nucleotide polymorphism-based genetic correlations between eating disorder and substance-userelated phenotypes. Significant positive genetic associations emerged between AUD and AN (r g =0.18; false discovery rate q=0.0006), cannabis initiation and AN (r g =0.23; q<0.0001), and cannabis initiation and AN with binge-eating (r g =0.27; q=0.0016). Conversely, significant negative genetic correlations were observed between three non-diagnostic smoking phenotypes (smoking initiation, current smoking, and cigarettes per day) and AN without binge-eating (r gs =-0.19 to -0.23; qs<0.04). The genetic correlation between AUD and AN was no longer significant after co-varying for MDD loci. The patterns of association between eating disorder-and substance-use-related phenotypes highlights the potentially complex and substance-specific relationships between these behaviors.Eating and Substance Use 12 A well-established phenotypic association exists between eating disorder and substance use phenotypes, with evidence for specific relations between particular types of eating disorders and substance use disorders. The prevalence of an alcohol use disorder (AUD) is greater among individuals with bulimia nervosa (BN) and binge-eating disorder (BED) than individuals with anorexia nervosa (AN) or healthy controls (Gadalla and Piran, 2007, Root et al., 2010).Similarly, individuals with BN or BED are at increased risk for smoking, nicotine dependence (ND) (Solmi et al., 2016, Wiederman andPryor, 1996), and cannabis use (Krug et al., 2008, Wiederman andPryor, 1996) compared with individuals with AN or healthy controls, though these results are not consistent (Root et al., 2010). Importantly, women with the bingeeating/purging subtype of AN report a higher prevalence of AUD, smoking, ND, and cannabis use than women with the restricting subtype of AN (Anzengruber et al., 2006, Krug et al., 2008, Root et al., 2010. Thus, binge eating-a transdiagnostic sy...