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This study developed a computational tool with a graphical interface and a web-service that allows the identification of phage regions through homology search and gene clustering. It uses G+C content variation evaluation and tRNA prediction sites as evidence to reinforce the presence of prophages in indeterminate regions. Also, it performs the functional characterization of the prophages regions through data integration of biological databases. The performance of PhageWeb was compared to other available tools (PHASTER, Prophinder, and PhiSpy) using Sensitivity (Sn) and Positive Predictive Value (PPV) tests. As a reference for the tests, more than 80 manually annotated genomes were used. In the PhageWeb analysis, the Sn index was 86.1% and the PPV was approximately 87%, while the second best tool presented Sn and PPV values of 83.3 and 86.5%, respectively. These numbers allowed us to observe a greater precision in the regions identified by PhageWeb while compared to other prediction tools submitted to the same tests. Additionally, PhageWeb was much faster than the other computational alternatives, decreasing the processing time to approximately one-ninth of the time required by the second best software. PhageWeb is freely available at http://computationalbiology.ufpa.br/phageweb.

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One of the main challenges to creating rich, seamless, and adaptive Augmented Reality (AR)

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Data mining can play a fundamental role in modern power systems. However, the companies in this area still face several difficulties to benefit from data mining. A major problem is to extract useful information from the currently available non-labeled digitized time series. This work focuses on automatic classification of faults in transmission lines. These faults are responsible for the majority of the disturbances and cascading blackouts. To circumvent the current lack of labeled data, the Alternative Transients Program (ATP) simulator was used to create a public comprehensive labeled dataset. Results with different preprocessing (e.g., wavelets) and learning algorithms (e.g., decision trees and neural networks) are presented, which indicate that neural networks outperform the other methods.

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