The amount of genetic differentiation between stocks of Atlantic cod (Gadus morhua) was estimated from electrophoretically detectable protein loci expressed in skeletal muscle and liver. Variant alleles at 13 of these loci were detected among nine samples covering most of the species range: North America, Greenland, Iceland, Barents Sea, Norwegian coastal waters, the North Sea, and the Baltic Sea. A very low amount of genetic differentiation was observed among stocks. Only two loci (LDH-3 and PGI-1) showed large statistically significant heterogeneity of allele frequencies between samples. Standard genetic distances (Nei) between these samples based on 10 variable loci ranged from 0.00015 to 0.01072 with Baltic cod as the genetically most divergent sample. There was a highly significant correlation between genetic and geographic distance for the samples from the Atlantic suggesting that a substantial gene flow has occurred between these stocks with geographic distance being an inhibiting factor. The relatively larger genetic distance between the Baltic cod and other stocks may reflect isolation resulting from geographic and perhaps ecological barriers. However, the absolute amount of genetic differentiation in the Atlantic cod appears to be very low throughout its range.

Allozymes and restriction fragment length polymorphisms (RFLP's) in genes of the NADH dehydrogenase complex (ND 5/6 genes) of mitochondrial DNA (mtDNA) were used to investigate the spatial genetic structure of Atlanto-Scandian herring (Clupea harengus). Samples (sample size=46–50/site) comprised Icelandic summer spawners, Norwegian spring spawners, and two fjord populations, Balsfjord and Trondheimsfjord, on the Norwegian coast. Fifty enzymes were assayed, and samples were routinely examined at 18 enzymes comprising 28 putative allozyme loci. Significant genetic differentiation (P < 0.001) was detected between Trondheimsfjord herring and all other samples, with apparent genetic homogeneity among remaining samples, including the Balsfjord; a region shown previously to contain an allozymically distinct population. Herring from the Balsfjord were shown allozymically to represent the Norwegian spring spawning group, suggesting the presence of two stocks, a deeper resident spawning (Balsfjord) and a shallower, non-native feeding population (Norwegian spring spawning). Variation at the ND5/6 genes using six restriction enzymes revealed 96 composite haplotypes in 196 fish. Mean haplotype diversity was high (0.92), though nucleotide divergence between samples was small (highest=0.00029, between Trondheimsfjord and Balsfjord samples; lowest=0.00003, between Icelandic summer and Balsfjord samples). Monte-Carlo %2 analysis of haplotype frequencies revealed no significant geographic heterogeneity among samples, thus revealing a discordant pattern of genetic differentiation produced by allozymes and mtDNA markers. The detection of a genetically divergent population in deeper waters of the Trondheimsfjord supports the existence of distinct deep-water resident populations in the Norwegian fjords.

A total of 1290 cod (Gadus morhua L.), sampled between 1985 and 1999 from a spawning area in the Trondheimsfjord, Norway, were assayed for the nuclear-encoded locus PanI (pantophysin). The majority of samples were taken during the spawning season at two nearby sampling locations at depths of 100 and 60 m, respectively. Genetic analysis revealed significant effects of cohort, sex and sampling location on allele frequencies at PanI. The contribution of each of these three factors to the total among-sample diversity (FST) of 8.01% at PanI was estimated to be 3.78, 2.55 and 1.68%, respectively. Sign tests revealed a significant excess of heterozygotes at both sampling locations in females; a significant excess of heterozygotes in males was observed at one of the localities. Mutation, genetic drift and immigration do not appear to contribute significantly to the observed genetic heterogeneity at PanI, leaving natural selection as the main explanatory factor for the Hardy-Weinberg imbalance. The dynamics of the selection at PanI appear to be complex. Analysis of age, sex and cohort proved crucial to disentangle putative explanatory factors from their secondary effects.

No abstract

A total of 1455 spawning cod, sampled from a local spawning area in Trondheimsfjord (Norway) between 1985 and 2002, was screened at the microsatellite loci Gmo132 and Gmo2. Samples from 15 spawning years comprising 29 consecutive cohorts were analysed. At the Gmo132 locus, but not at Gmo2, allele frequencies varied significantly among sampling years as well as cohorts, corresponding to FST-values of 0.004 and 0.006, respectively. Both loci showed examples of significant deviations from Hardy–Weinberg expectation within sampling years as well as cohorts, manifested as deficiencies of heterozygotes. Combining the p-values from the single tests (Fisher's method) revealed an overall significant p-value for deviation from the Hardy–Weinberg expectations at Gmo132 but not at Gmo2. Trend tests showed significant HW deficiencies at both loci for annual samples but not for cohorts. Possible reasons for the deficiencies were discussed; inter alia the existence of null alleles, or a form of pseudo Wahlund effect due to a patchy distribution of habitats for settling O-group cod in the Trondheimsfjord. It was noted that there might be a relationship between the relatively high temporal within-population variability of allele frequencies at Gmo132 and the fact that among microsatellite loci studied so far, Gmo132 is the one that usually shows the highest genetic differentiation geographically in cod.