SummaryRecent genomic analyses show that the earliest peoples reaching Remote Oceania – associated with Austronesian-speaking Lapita culture – were almost completely East Asian, without detectable Papuan ancestry. Yet Papuan-related genetic ancestry is found across present-day Pacific populations, indicating that peoples from Near Oceania have played a significant – but largely unknown – ancestral role. Here, new genome-wide data from 19 South Pacific individuals provide direct evidence of a so-far undescribed Papuan expansion into Remote Oceania starting ~2,500 years before present, far earlier than previously estimated and supporting a model from historical linguistics. New genome-wide data from 27 contemporary ni-Vanuatu demonstrate a subsequent and almost complete replacement of Lapita-Austronesian by Near Oceanian ancestry. Despite this massive demographic change, incoming Papuan languages did not replace Austronesian languages. Population replacement with language continuity is extremely rare – if not unprecedented – in human history. Our analyses show that rather than one large-scale event, the process was incremental and complex, with repeated migrations and sex-biased admixture with peoples from the Bismarck Archipelago.

Highlights d An Upper Paleolithic Siberian shows a deep link with the First Peoples of the Americas d A 10,000-year continuum of Ancient North Eurasian ancestry in the Lake Baikal region d The Neolithic to Bronze Age population formation occurred through prolonged local admixture d Long-range human and Y. pestis mobility across Eurasia during the Early Bronze Age

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Consuming the milk of other species is a unique adaptation of Homo sapiens, with implications for health, birth spacing and evolution. Key questions nonetheless remain regarding the origins of dairying and its relationship to the genetically-determined ability to drink milk into adulthood through lactase persistence (LP). As a major centre of LP diversity, Africa is of significant interest to the evolution of dairying. Here we report proteomic evidence for milk consumption in ancient Africa. Using liquid chromatography tandem mass spectrometry (LC-MS/MS) we identify dairy proteins in human dental calculus from northeastern Africa, directly demonstrating milk consumption at least six millennia ago. Our findings indicate that pastoralist groups were drinking milk as soon as herding spread into eastern Africa, at a time when the genetic adaptation for milk digestion was absent or rare. Our study links LP status in specific ancient individuals with direct evidence for their consumption of dairy products.

The resource-poor, isolated islands of Wallacea have been considered a major adaptive obstacle for hominins expanding into Australasia. Archaeological evidence has hinted that coastal adaptations in Homo sapiens enabled rapid island dispersal and settlement; however, there has been no means to directly test this proposition. Here, we apply stable carbon and oxygen isotope analysis to human and faunal tooth enamel from six Late Pleistocene to Holocene archaeological sites across Wallacea. The results demonstrate that the earliest human forager found in the region c. 42,000 years ago made significant use of coastal resources prior to subsequent niche diversification shown for later individuals. We argue that our data provides clear insights into the huge adaptive flexibility of our species, including its ability to specialize in the use of varied environments, particularly in comparison to other hominin species known from Island Southeast Asia.

ABSTRACT. The arid Central Andes are a key site to study changes in intensity and movement of the three main atmospheric circulation systems over South America: the South American Summer Monsoon (SASM), the Westerlies and the El Niño Southern Oscillation (ENSO). In this semi-arid to arid region glaciers are particularly sensitive to precipitation changes and thus the timing of past

It is difficult to untangle the mixed influences of high-and low-latitude climate forcing in the eastern equatorial Pacific (EEP). Here we test the hypothesis that the Southern Ocean drove change in the EEP via subsurface intermediate waters during the last deglaciation. We use the δ 18 O signature of benthic foraminifera to reconstruct water density changes during the last 25 kyr at three intermediate water depths (370 m, 600 m, and 1000 m) in the EEP. Carbonate δ 18 O records a combined signature of temperature and salinity and is therefore more closely related to density than temperature or salinity alone. We find that benthic foraminiferal δ 18 O values decreased first in the subsurface, simultaneously with rising temperatures over Antarctica, and propagated up to the surface within~3 kyr. The early subsurface response initiated a rapid decrease in density stratification over the upper water column as indicated by reduced δ 18 O gradients between surface and intermediate depths. Stratification of the upper water column remained low through the termination, with stratification minima reached during Heinrich Stadial 1 and the Younger Dryas (YD), synchronous with the two-part deglacial rise in atmospheric CO 2 . Centennial-scale shifts toward heavier δ 18 O signatures at 370 and 600 m during the YD indicate short-lived shifts in the Subantarctic Mode Water/Antarctic Intermediate Water boundary to shallower intermediate depths. We suggest that decreased density gradients during the deglaciation accelerated vertical mixing across the EEP, and potentially the entire South Pacific subtropical gyre, which enhanced CO 2 delivery from depth to the surface ocean and atmosphere.

Stable isotope analysis has been utilized in archaeology since the 1970s, yet standardized protocols for terminology, sampling, pretreatment evaluation, calibration, quality assurance and control, data presentation, and graphical or statistical treatment still remain lacking in archaeological applications. Here, we present recommendations and requirements for each of these in the archaeological context of: bulk stable carbon and nitrogen isotope analysis of organics; bulk stable carbon and oxygen isotope analysis of carbonates; single compound stable carbon and nitrogen isotope analysis on amino acids in collagen and keratin; and single compound stable carbon and hydrogen isotope analysis on fatty acids. The protocols are based on recommendations from the Commission on Isotopic Abundances and Atomic Weights of the International Union of Pure and Applied Chemistry (IUPAC) as well as an expanding geochemical and archaeological science experimental literature. We hope that this will provide a useful future reference for authors and reviewers engaging with the growing number of stable isotope applications and datasets in archaeology.