The International Cancer Genome Consortium (ICGC) is a collaborative effort to characterize genomic abnormalities in 50 different cancer types. To make this data available, the ICGC has created the ICGC Data Portal. Powered by the BioMart software, the Data Portal allows each ICGC member institution to manage and maintain its own databases locally, while seamlessly presenting all the data in a single access point for users. The Data Portal currently contains data from 24 cancer projects, including ICGC, The Cancer Genome Atlas (TCGA), Johns Hopkins University, and the Tumor Sequencing Project. It consists of 3478 genomes and 13 cancer types and subtypes. Available open access data types include simple somatic mutations, copy number alterations, structural rearrangements, gene expression, microRNAs, DNA methylation and exon junctions. Additionally, simple germline variations are available as controlled access data. The Data Portal uses a web-based graphical user interface (GUI) to offer researchers multiple ways to quickly and easily search and analyze the available data. The web interface can assist in constructing complicated queries across multiple data sets. Several application programming interfaces are also available for programmatic access. Here we describe the organization, functionality, and capabilities of the ICGC Data Portal.Database URL: http://dcc.icgc.org
BioMart Central Portal is a first of its kind, community-driven effort to provide unified access to dozens of biological databases spanning genomics, proteomics, model organisms, cancer data, ontology information and more. Anybody can contribute an independently maintained resource to the Central Portal, allowing it to be exposed to and shared with the research community, and linking it with the other resources in the portal. Users can take advantage of the common interface to quickly utilize different sources without learning a new system for each. The system also simplifies cross-database searches that might otherwise require several complicated steps. Several integrated tools streamline common tasks, such as converting between ID formats and retrieving sequences. The combination of a wide variety of databases, an easy-to-use interface, robust programmatic access and the array of tools make Central Portal a one-stop shop for biological data querying. Here, we describe the structure of Central Portal and show example queries to demonstrate its capabilities.Database URL: http://central.biomart.org.
Although most behavioral security studies focus on organizational in-role behaviors such as information security policy (ISP) compliance, the role of organizational extra-role behaviors—security behaviors that benefit organizations but are not specified in ISPs—has long been overlooked. This study examines (1) the consequences of organizational in-role and extra-role security behaviors on the effectiveness of ISPs and (2) the role of formal and social controls in enhancing in-role and extra-role security behaviors in organizations. We propose that both in-role security behaviors and extra-role security behaviors contribute to ISP effectiveness. Furthermore, based on social control theory, we hypothesize that social control can boost both in- and extra-role security behaviors. Data collected from practitioners—including information systems (IS) managers and employees at many organizations—confirmed most of our hypotheses. Survey data from IS managers substantiated the importance of extra-role behaviors in improving ISP effectiveness. Paired data, collected from managers and employees in the same organizations, indicated that formal control and social control individually and interactively enhance both in- and extra-role security behaviors. We conclude by discussing the implications of this research for academics and practitioners, along with compelling future research possibilities.
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