The effects of flow regulation on macroinvertebrates and periphytic diatoms were examined in the HawkesburyNepean River system in Australia. Regulated sites below eight dams or weirs were compared with unregulated sites above the impoundments and sites on two nearby unregulated streams. The management of the water supply during the study created two types of flow regulation, sites with water supply releases and sites with comparatively small or no releases. The macroinvertebrate communities in three habitats and periphytic diatoms below the storages and weirs differed from the biota at unregulated sites above the weirs and on unregulated systems. The number of macroinvertebrate taxa in riffle and pool-rock assemblages was significantly lower at regulated sites when compared with unregulated sites and the number of stream edge macroinvertebrate and diatom taxa was unaffected by regulation. Riffle and pool-rock macroinvertebrate assemblages differed between the two types of regulation. However, periphytic diatom and edge habitat macroinvertebrate assemblages did not differ between the two types of flow regulation. Examination of environmental variables associated with the change in the biota suggested that the principal effect of the management of the water supply system in the Hawkesbury-Nepean River was changed hydrology rather than altered water quality.

Summary 1. Diatoms were sampled in the spring of 1994 and the autumn of 1995 at 137 pristine or near‐pristine reference sites on large and small streams at various altitudes in eastern New South Wales and Victoria. Scrapings were taken from five firm substrata across a range of microhabitat conditions at each site on each occasion. For each substratum, 100 valves were identified to genus level. 2. Multivariate statistical models were constructed to predict the probability of occurrence of each genus at a given site under near‐pristine conditions on the basis of physical features of the site that are not affected by human activity. Model predictions were compared with the flora observed at the reference sites and at 55 test sites affected by varying degrees of human disturbance. 3. Test sites were characterized more by the presence of genera not predicted by the model than by the absence of predicted genera. The degree of departure from model predictions was related mainly to increasing alkalinity, electrical conductivity, hardness and pH of river water. We therefore conclude that the main effect of human activity on the composition of diatom communities in the rivers of coastal south‐eastern Australia has been to increase genus richness through enrichment with alkaline salts. 4. The models did not perform as well as similar models applied to river macroinvertebrates at the family level, perhaps because of greater temporal variability in diatom communities and differences in the environmental variables to which diatoms and macroinvertebrates respond. Means of improving the current models are discussed.

Of all ecosystems, freshwaters support the most dynamic and highly concentrated biodiversity on Earth. These attributes of freshwater biodiversity along with increasing demand for water mean that these systems serve as significant models to understand drivers of global biodiversity change. Freshwater biodiversity changes are often attributed to hydrological alteration by water-resource development and climate change owing to the role of the hydrological regime of rivers, wetlands and floodplains affecting patterns of biodiversity. However, a major gap remains in conceptualising how the hydrological regime determines patterns in biodiversity's multiple spatial components and facets (taxonomic, functional and phylogenetic). We synthesised primary evidence of freshwater biodiversity responses to natural hydrological regimes to determine how distinct ecohydrological mechanisms affect freshwater biodiversity at local, landscape and regional spatial scales. Hydrological connectivity influences local and landscape biodiversity, yet responses vary depending on spatial scale. Biodiversity at local scales is generally positively associated with increasing connectivity whereas landscape-scale biodiversity is greater with increasing fragmentation among locations. The effects of hydrological disturbance on freshwater biodiversity are variable at separate spatial scales and depend on disturbance frequency and history and organism characteristics. The role of hydrology in determining habitat for freshwater biodiversity also depends on spatial scaling. At local scales, persistence, stability and size of habitat each contribute to patterns of freshwater biodiversity yet the responses are variable across the organism groups that constitute overall freshwater biodiversity. We present a conceptual model to unite the effects of different ecohydrological mechanisms on freshwater biodiversity across spatial scales, and develop four principles for applying a multi-scaled understanding of freshwater biodiversity responses to hydrological regimes. The protection and restoration of freshwater biodiversity is both a fundamental justification and a central goal of environmental water allocation worldwide. Clearer integration of concepts of spatial scaling in the context of understanding impacts of hydrological regimes on biodiversity will increase uptake of evidence into environmental flow implementation, identify suitable biodiversity targets responsive to hydrological change or restoration, and identify and manage risks of environmental flows contributing to biodiversity decline.

Summary Alteration of flow and thermal regimes is a key consequence of human use of river and floodplain ecosystems, and these impacts result from a range of interacting ecological mechanisms. Environmental flow regimes are a management strategy to restore or maintain ecologically important aspects of river hydrology. However, inadequate understanding of the processes that determine the effects of flow on population dynamics of biota hinders the maximum benefits of environmental flows. Spawning and recruitment of riverine fish is mediated by temperature, access to nursery habitat and the timing and availability of resources. Differences in population sizes between regulated and unregulated rivers are often attributed to the effect of flow and thermal regime change on population dynamics. Dams and extraction of water have altered the flow and thermal regimes of rivers in the northern Murray–Darling Basin, Australia. Combining three studies, we (i) examined differences in the recruitment of fish and patterns of potential prey availability between a regulated and unregulated river, (ii) studied the relationships between patterns of flow and temperature on spawning of fish in two rivers with contrasting regulated flow regimes and (iii) experimentally tested the effects of environmental flow releases in a regulated river on fish spawning and recruitment by comparing patterns over time against two unregulated rivers. Comparisons between regulated and unregulated rivers indicated that the significantly lower recruitment of Macquaria ambigua in the regulated river was linked with large differences in available prey. Species‐specific differences in the abundance of fish larvae between two regulated rivers indicated that different reproductive strategies determine population‐level responses to flow regulation. Finally, the experimental flow releases in a regulated reach during late spring did not result in a change in spawning and recruitment of fish, although influences of antecedent flow and temperature on larval and juvenile assemblage composition were significant. These findings indicate that the responses of fish spawning and recruitment to flow regime change and restoration are dependent on the conditions that determine the success of these critical life‐history processes. Specifically, key effects of flow regulation are reduced summer water temperatures due to hypolimnetic discharge from dams, and the reduced frequency and duration of low flows. Reduced water temperatures limit opportunities for fish to spawn, and sustained base flows were associated with lower densities of potential prey sources in conjunction with potential flushing of larvae and juveniles, thereby influencing recruitment. The benefits of environmental flow programmes can be enhanced if flow regimes are modified to ensure that abiotic and biotic conditions that support persistence of biota are provided. In conjunction with flow pulses and floods, low flows are a natural and ecologically important component of flow regimes, particularly in drylan...

Fish assemblages in six reaches of the Hawkesbury–Nepean River were studied to identify the effects of two types of riparian vegetation; well‐vegetated banks supporting complex flora dominated by trees and shrubs, and grassed banks, that have been colonised only by grasses after historical deforestation. The fish assemblages showed both spatial and temporal differences and habitats adjacent to grassed banks supported more individuals and more fish species than well‐vegetated banks. Three small species of fish, firetail gudgeon, Hypseleotris galii (Ogilby), flathead gudgeon, Philypnodon grandiceps (Krefft), and empire gudgeon, Hypseleotris compressa (Krefft), occurred in greater abundances adjacent to grassed banks, but freshwater mullet, Myxus petardi (Castelnau), were less abundant near grassed banks than beside well‐vegetated banks. Differences were also shown in the size frequencies of the four larger fish species between riparian vegetation types. The observed differences in the distributions of fish species appeared to be related to the greater abundance aquatic macrophytes near grassed banks, probably an effect of shading of macrophytes near well‐vegetated banks.

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Proposed environmental flow regime changes downstream of a major water supply dam have been assessed in terms of effects on depth, velocity and fish passage across natural, gravel-bed riffles and rapids. This study focussed on passage requirements for Australian bass, Macquaria novemaculeata (Perciformes, Percichthyidae), a catadromous fish of considerable ecological and recreational fishing importance. Some 23 major riffles and rapids occur between the dam and the tidal limit over a river length of 25 km. Reconnaissance investigations of riffle slope, length, width, depth and morphologic characteristics indicated that wideshallow, steep-turbulent and bifurcating riffle morphologies were most likely to cause problems for upstream bass passage under low flow conditions. Two approaches were used to investigate riffle depths and velocities over a range of flows. A rapid assessment approach directly measured thalweg depths and velocities under two controlled flow release rates in riffles identified as being potentially problematic to upstream bass passage. Detailed topographic surveys and two dimensional hydraulic modelling with River2D was undertaken for two riffles identified as 'worst case' examples of wide-shallow and steep-turbulent morphologies. Results from both approaches were consistent and complementary. Both approaches identified riffles where minimum depths and maximum velocities were likely to be problematic for upstream passage by Australian bass at a flow rate of 130 MLd À1 (the current regulated flow release) but were mitigated at flow rates above 300 MLd À1. Assessment of environmental flow regime transparency and translucency threshold options with regard to a 300 MLd À1 target flow indicated that options where the transparency threshold was set at the 80th flow duration percentile (flows equalled or exceeded for 80% of time), and varied according to the monthly pattern of natural flows, improved hydraulic conditions for upstream bass migration.

The migratory response and behaviour of catadromous Australian bass with regard to hourly mean river flows and water temperatures was assessed over 15 months. Fish movement was assessed using a 75-km passive acoustic telemetry array in the regulated Shoalhaven River below Tallowa Dam, NSW, Australia. The majority (62%) of downstream pre-spawning migrations from freshwater to estuarine habitats were stimulated by a series of flow pulses from April to September, but a proportion of fish (38%) commenced downstream migrations under regulated baseflow conditions after a sustained decrease in water temperature to below 15 C in late autumn. Equal numbers of fish undertook post-spawning upstream return migrations during flow pulses and during regulated baseflow conditions, with regulated baseflow migrants exhibiting a preference for dusk-dawn passage through freshwater pool-riffle sequences. The median magnitude of flow pulses at the time of commencement of downstream and upstream freshwater migrations by Australian bass was not large, equivalent to natural (in the absence of river regulation) flows equalled or exceeded for 56% and 48% of time, respectively. There was no evidence for increased numbers of migrants with increasing flow pulse magnitude, with individual fish ignoring some flow pulses but responding to subsequent events. In regulated rivers, the release of more frequent flow pulses with peak magnitudes approximating the natural 50th flow duration percentile may be more effective in stimulating greater numbers of Australian bass to undertake pre-spawning and post-spawning migrations between freshwater and estuarine habitats than the release of a single, larger event. The propensity of Australian bass to also undertake spawning migrations under regulated baseflow conditions emphasizes the need for provision of baseflow regimes in regulated rivers that can facilitate migrations by large bodied fishes.