Large-scale high-throughput plant phenotyping (sometimes called phenomics) is becoming increasingly important in plant biology and agriculture and is essential to cutting-edge plant breeding and management approaches needed to meet the food and fuel needs for the next century. Currently, the application of these approaches is severely limited by the availability of appropriate instrumentation and by the ability to communicate experimental protocols, results and analyses. To address these issues, we have developed a low-cost, yet sophisticated open-source scientific instrument designed to enable communities of researchers, plant breeders, educators, farmers and citizen scientists to collect high-quality field data on a large scale. The MultispeQ provides measurements in the field or laboratory of both, environmental conditions (light intensity and quality, temperature, humidity, CO2 levels, time and location) and useful plant phenotypes, including photosynthetic parameters—photosystem II quantum yield (ΦII), non-photochemical exciton quenching (NPQ), photosystem II photoinhibition, light-driven proton translocation and thylakoid proton motive force, regulation of the chloroplast ATP synthase and potentially many others—and leaf chlorophyll and other pigments. Plant phenotype data are transmitted from the MultispeQ to mobile devices, laptops or desktop computers together with key metadata that gets saved to the PhotosynQ platform (https://photosynq.org) and provides a suite of web-based tools for sharing, visualization, filtering, dissemination and analyses. We present validation experiments, comparing MultispeQ results with established platforms, and show that it can be usefully deployed in both laboratory and field settings. We present evidence that MultispeQ can be used by communities of researchers to rapidly measure, store and analyse multiple environmental and plant properties, allowing for deeper understanding of the complex interactions between plants and their environment.

The work demonstrates the use of detailed, high-throughput phenotyping to generate and test mechanistic models to explain the genetic diversity of photosynthetic responses to abiotic stress. We assessed a population of recombinant inbred lines (RILs) of cowpea (Vigna unguiculata. (L.) Walp.) with significant differences in a range of photosynthetic responses to chilling. We found well-defined, colocalized (overlapping) QTL intervals for photosynthetic parameters, suggesting linkages among the redox states of Q, the thylakoid pmf, through effects on cyclic electron flow and photodamage to PSII. We propose that these genetic variations optimize photosynthesis in the tolerant lines under low temperatures, preventing recombination reactions within Photosystem II that can lead to deleterious O production. By contrast, we did not observe linkages to PSI redox state, PSI photodamage or ATP synthase activity, or nyctinastic (diurnally controlled) leaf movements, likely indicating that several proposed models likely do not contribute to the genetic control of photosynthesis at low temperature in our mapping panel. The identified QTL intervals include a range of potential causative genetic components, with direct applications to breeding of photosynthesis for more climate-resilient productivity.

We explored the effects, on photosynthesis in cowpea (Vigna unguiculata) seedlings, of high temperature and light—environmental stresses that often co‐occur under field conditions and can have greater impact on photosynthesis than either by itself. We observed contrasting responses in the light and carbon assimilatory reactions, whereby in high temperature, the light reactions were stimulated while CO2 assimilation was substantially reduced. There were two striking observations. Firstly, the primary quinone acceptor (QA), a measure of the regulatory balance of the light reactions, became more oxidized with increasing temperature, suggesting increased electron sink capacity, despite the reduced CO2 fixation. Secondly, a strong, O2‐dependent inactivation of assimilation capacity, consistent with down‐regulation of rubisco under these conditions. The dependence of these effects on CO2, O2 and light led us to conclude that both photorespiration and an alternative electron acceptor supported increased electron flow, and thus provided photoprotection under these conditions. Further experiments showed that the increased electron flow was maintained by rapid rates of PSII repair, particularly at combined high light and temperature. Overall, the results suggest that photodamage to the light reactions can be avoided under high light and temperatures by increasing electron sink strength, even when assimilation is strongly suppressed.

Cowpea is well adapted to environmental conditions that affect crop production such as drought, high temperatures and other biotic stresses compared with other crops. Notwithstanding, growth and development of many cowpea cultivars are affected by drought and high temperatures, especially during floral development. This is because cowpea cultivars tend to have narrow range of adaptation as cultivars developed for one zone usually are not very productive in other zones. A study on the growth and yield performance of seven cowpea varieties was conducted during the 2012 major and minor rainy seasons at the CSIR-Crops Research Institute, Kwadaso-Kumasi, Ghana to compare the performance of the seasonal variation on each variety. These improved varieties Nhyira, Tona, Asetenapa, Asomdwe, Hewale, Videza and IT 89KD374-57 were evaluated using a randomized complete block design and replicated three times. The results showed that varieties Hewale, Videza and Nhyira gave higher seed yields, whereas IT 89KD374-57 and Asetenapa had lower seed yields. Nhyira and Hewale gave comparatively better seed yields under both conditions. Hewale was the highest seed-yielding genotype under both major and minor raining season. Cowpea production could be a profitable agribusiness for cowpea growers in Ghana considering the higher returns in terms of grain yield obtained in both seasons.Keywords: seed and dry matter yield, legume and minor season

The agronomic response of four tomato (Solanum lycopersicum L.) varieties to fertilizer application was examined at the CSIR-Crops Research Institute, Kwadaso-Kumasi in the Forest agro-ecological zone of Ghana during the 2013 growing season. The four tomato varieties Shasta, Heinz, CRI POO and CRI 034 were evaluated on five different fertilizer types using a split plot arrangements in randomized complete block design with three replications. The Tomato varieties were the main plots, with the fertilizer treatments as the subplots. The CSIR-CRI breeding lines (CRI P00 and CRI P034) were able to yield higher than the exotic varieties. Using Winner fertilizer (6 g/plant at two weeks after transplanting (WAT) ) and Sulfan (3 g/plant at 4 WAT) CRI P00 produced the highest yield (26.4 t/ha) followed by chicken manure (250 g/plant at 2 and 4 WAT) (23.1 t/ha). CRI P00 with Winner + Sulfan fertilizer application also produced significantly (p≤0.05) higher fruit yield (26.4 t/ha). Fertilizer application however did not have any significant effect on the days to flowering over the control.Fertilizer application however, increased the number of branching for the tomato plants with Unik15 + Urea having significantly more branches compared to the control. Results from this study showed that tomato yields in the Forest zones in Ghana can be increased using improved varieties and recommended fertilizer rates.

Cowpea is well adapted to environmental conditions that affect crop production such as drought, high temperatures and other biotic stresses compared with other crops. Notwithstanding, growth and development of many cowpea cultivars are affected by drought and high temperatures, especially during floral development. This is because cowpea cultivars tend to have narrow range of adaptation as cultivars developed for one zone usually are not very productive in other zones. A study on the yield and growth performance of seven cowpea varieties was conducted during the 2012 major and minor rainy seasons at the CSIR-Crops Research Institute, Kwadaso-Kumasi, Ghana to compare the performance of the seasonal variation on each variety. These improved varieties Nhyira, Tona, Asetenapa, Asomdwe, Hewale, Videza and IT 89KD374-57 were evaluated using a randomized complete block design and replicated three times. The results showed that varieties Hewale, Videza and Nhyira gave higher seed yields, whereas IT 89KD374-57 and Asetenapa had lower seed yields. Nhyira and Hewale gave comparatively better seed yields under both conditions. Hewale was the highest seedyielding genotype under both major and minor raining season. Cowpea production could be a profitable agribusiness for cowpea growers in Ghana considering the higher returns in terms of grain yield obtained in both seasons.

Vegetable plays a key role in food and nutrition security in Ghana as the country’s food system shifts from food quantity to diet quality and health benefits. This chapter looks at the role vegetables play in the diets of humans in ensuring food and nutrition security. Traditional locally available underutilized vegetable crops as well as exotic vegetable crops could be utilized to improve nutrition and health. One of the strategies for promoting vegetable production is the development and adoption of innovative and modern technologies to address major challenges impeding the advancement of vegetable production in Ghana. These challenges include lack of improved varieties, nonfunctional seed systems, poor infrastructure for storage and processing, uncontrolled use of agrochemicals, etc. Genetic manipulation, soil and water management as well as integrated pest and disease management have been harnessed with significant achievement to boost vegetable production. Other emerging, including nursery management, controlled environment (such as a greenhouse), grafting, post-harvest handling, digital marketing, information and extension services can also be promoted. Greenhouse production increases vegetable crop quality and productivity, which results in higher economic returns. Finally, the chapter highlights the enormous prospects and contributions of vegetable production towards reducing rural poverty and unemployment.

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