The integrative Vaccine Investigation and Online Information Network (VIOLIN) vaccine research database and analysis system (http://www.violinet.org) curates, stores, analyses and integrates various vaccine-associated research data. Since its first publication in NAR in 2008, significant updates have been made. Starting from 211 vaccines annotated at the end of 2007, VIOLIN now includes over 3240 vaccines for 192 infectious diseases and eight noninfectious diseases (e.g. cancers and allergies). Under the umbrella of VIOLIN, >10 relatively independent programs are developed. For example, Protegen stores over 800 protective antigens experimentally proven valid for vaccine development. VirmugenDB annotated over 200 ‘virmugens’, a term coined by us to represent those virulence factor genes that can be mutated to generate successful live attenuated vaccines. Specific patterns were identified from the genes collected in Protegen and VirmugenDB. VIOLIN also includes Vaxign, the first web-based vaccine candidate prediction program based on reverse vaccinology. VIOLIN collects and analyzes different vaccine components including vaccine adjuvants (Vaxjo) and DNA vaccine plasmids (DNAVaxDB). VIOLIN includes licensed human vaccines (Huvax) and veterinary vaccines (Vevax). The Vaccine Ontology is applied to standardize and integrate various data in VIOLIN. VIOLIN also hosts the Ontology of Vaccine Adverse Events (OVAE) that logically represents adverse events associated with licensed human vaccines.
Cardiopulmonary bypass (CPB) elicits a systemic inflammatory response. The cause may include surface-induced leucocyte activation and hemolysis. An in-vitro study was designed to describe the effects of both suction and an air-blood interface independently, and in combination on leucocyte and platelet activation, and hemolysis in an in-vitro model. Fresh human blood was drawn and tested under 4 different conditions including: control (A), 10 minutes of − 600 mmHg suction (B), 10 minutes of blood exposure to room air at 100 ml/min (C), and 10 min of simultaneous suction and air flow (D). Samples were analyzed by flow cytometry (platelets and leucocytes) and plasma free hemoglobin (PFHb). Leucocyte CD11b expression and platelet P-selectin (CD62P) were analyzed by flow cytometry. Compared to baseline, granulocytes were significantly activated by air (Group C, p=0.0029), and combination (Group D, p=.0123) but not by suction alone (Group B). Monocytes and platelets were not significantly activated in any group. The PFHb increased significantly in Group C (p<0.001) and Group D (p<0.001). This study suggests that the inflammatory response and associated hemolysis during CPB may be related to air exposure, which could be reduced by minimizing the air exposure of air to blood during cardiotomy suction.
scite is a Brooklyn-based organization that helps researchers better discover and understand research articles through Smart Citations–citations that display the context of the citation and describe whether the article provides supporting or contrasting evidence. scite is used by students and researchers from around the world and is funded in part by the National Science Foundation and the National Institute on Drug Abuse of the National Institutes of Health.
hi@scite.ai
10624 S. Eastern Ave., Ste. A-614
Henderson, NV 89052, USA
Copyright © 2024 scite LLC. All rights reserved.
Made with 💙 for researchers
Part of the Research Solutions Family.