We report the characteristics of four optochin-resistant (Opt r ) Streptococcus pneumoniae isolates from Brazil. All four Opt r isolates presented mutations in the nucleotide sequence coding for the c subunit of F 0 F 1 ATPase. Two isolates showed mutations in codons 23 (leading to the deduced amino acid substitution isoleucine instead of alanine) and 49 (serine instead of alanine, a novel type of mutation detected at this position), respectively. Two additional novel mutations, both located in codon 45, were detected in the other two isolates, corresponding to leucine or valine (instead of phenylalanine). The data indicate that three previously unrecognized alterations were detected in the atpC gene of S. pneumoniae and that Opt resistance among Brazilian pneumococcal isolates is not related to a specific pneumococcal serotype, antimicrobial-resistance profile, or clonal group.Streptococcus pneumoniae is one of the most important human pathogens, remaining as a major cause of communityacquired infections, such as pneumonia, bacteremia, meningitis, otitis media, and sinusitis (3). Because of the increasing frequency of antimicrobial resistance, accurate identification and antimicrobial susceptibility testing are essential for correct diagnosis and treatment of patients. Determination of phenotypic characteristics is conventionally used in diagnostic laboratories for the identification of S. pneumoniae, including colony morphology on blood agar plates, optochin (Opt) susceptibility, bile solubility, and reactivity with type-specific antisera for detection of capsular polysaccharide antigen (1, 11). Several commercial systems and rapid kits are also available. More recently, a variety of molecular methods, including a DNA probe directed to a section of rRNA (8), PCR assays for detection of genes encoding diverse virulence factors (4,12,14), and DNA-DNA reassociation (1), have been applied to identify pneumococcal isolates. Despite the development of newer methods, most routine laboratories still rely on the results of Opt susceptibility testing as the primary or even the only test for the presumptive identification of pneumococci. Occasionally, however, isolates of S. pneumoniae exhibiting an optochin-resistant (Opt r ) phenotype have been reported (2,6,7,10,13,15). The occurrence of such a phenotypic variant is a potential cause of problems in the precise characterization of this agent, leading to misidentification. The Opt r phenotype is attributed to mutations in the atpC gene that codes for the molecular target of Opt, the transmembrane F 0 F 1 ATPase, involved in proton transportation in the respiratory chain (9, 13). Alterations in ␣-helix 1, corresponding to codons 14, 20, and 23 (6, 13), and in ␣-helix 2, corresponding to codons 48, 49, and 50 (7, 13) of the c subunit of the F 0 complex of the molecule, have already been described in clinical isolates of S. pneumoniae. A mutation located in the a subunit of F 0 F 1 ATPase was also described (13). To date, reports of the occurrence of Opt r pneumococci are ...