Cone beam computed tomography (CBCT) is a standard solution for in-room image guidance for radiation therapy. It is used to evaluate and compensate for anatomopathological changes between the dose delivery plan and the fraction delivery day. CBCT is a fast and versatile solution, but it suffers from drawbacks like low contrast and requires proper calibration to derive density values. Although these limitations are even more prominent with in-room customized CBCT systems, strategies based on deep learning have shown potential in improving image quality. As such, this article presents a method based on a convolutional neural network and a novel two-step supervised training based on the transfer learning paradigm for shading correction in CBCT volumes with narrow field of view (FOV) acquired with an ad hoc in-room system. Methods: We designed a U-Net convolutional neural network, trained on axial slices of corresponding CT/CBCT couples. To improve the generalization capability of the network, we exploited two-stage learning using two distinct data sets. At first, the network weights were trained using synthetic CBCT scans generated from a public data set, and then only the deepest layers of the network were trained again with real-world clinical data to fine-tune the weights. Synthetic data were generated according to real data acquisition parameters. The network takes a single grayscale volume as input and outputs the same volume with corrected shading and improved HU values. Results: Evaluation was carried out with a leave-one-out cross-validation, computed on 18 unique CT/CBCT pairs from six different patients from a real-world dataset. Comparing original CBCT to CT and improved CBCT to CT,we obtained an average improvement of 6 dB on peak signal-to-noise ratio (PSNR), +2% on structural similarity index measure (SSIM).The median interquartile range (IQR) Hounsfield unit (HU) difference between CBCT and CT improved from 161.37 (162.54) HU to 49.41 (66.70) HU. Region of interest (ROI)-based HU difference was narrowed by 75% in the spongy bone (femoral head), 89% in the bladder, 85% for fat, and 83% for muscle. The improvement in contrast-to-noise ratio for these ROIs was about 67%.GLOSSARY: CBCT, cone beam computed tomography; CNR, contrast-to-noise ratio; CT, computed tomography; CTV, clinical target volume; DIR, deformable image registration; D r , data set containing only real images; D s , data set containing synthetic CBCT images and real CT; FOV, field of view; FT x , model trained with transfer learning on x blocks, where x can be 1, 2 or 3; HU, Hounsfield unit; IQR, interquartile range; LOO-CV, leave-one-out cross-validation; MAE, mean absolute error; noFT, U-Net model trained without transfer learning; pCT, planning CT; PSNR, peak signal-to-noise ratio; ROI, region of interest; SSIM, structural similarity index measureThis is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is prope...
Eye tracking techniques based on deep learning are rapidly spreading in a wide variety of application fields. With this study, we want to exploit the potentiality of eye tracking techniques in ocular proton therapy (OPT) applications. We implemented a fully automatic approach based on two-stage convolutional neural networks (CNNs): the first stage roughly identifies the eye position and the second one performs a fine iris and pupil detection. We selected 707 video frames recorded during clinical operations during OPT treatments performed at our institute. 650 frames were used for training and 57 for a blind test. The estimations of iris and pupil were evaluated against the manual labelled contours delineated by a clinical operator. For iris and pupil predictions, Dice coefficient (median = 0.94 and 0.97), Szymkiewicz–Simpson coefficient (median = 0.97 and 0.98), Intersection over Union coefficient (median = 0.88 and 0.94) and Hausdorff distance (median = 11.6 and 5.0 (pixels)) were quantified. Iris and pupil regions were found to be comparable to the manually labelled ground truths. Our proposed framework could provide an automatic approach to quantitatively evaluating pupil and iris misalignments, and it could be used as an additional support tool for clinical activity, without impacting in any way with the consolidated routine.
A robotic cone-beam computed tomography (CT) scanner has inherent advantages. In particular, it enables source and detector trajectories capable of extending the field-of-view (FOV) of the reconstructed CT images, where the FOV is defined as the region in the source trajectory plane for which all ray lines are acquired (at any position and direction in this plane). Previous extensions of the FOV used an offset detector or a displaced center of rotation and a single full 360 • scan. However, due to limitations in the conventional range of motion inside the treatment room to avoid collisions, some systems can only perform short scans. This paper investigates a new approach to FOV extension for an existing system by adapting the FOV extension to two complementary short scans with displaced centers of rotation. We validate this approach on numerical simulations of the Forbild thorax phantom.
Radiotherapy commonly utilizes CBCT for patient positioning and treatment monitoring. CBCT is deemed to be secure for patients, making it suitable for the delivery of fractional doses. However, limitations such as a narrow field of view, beam hardening, scattered radiation artifacts, and variability in pixel intensity hinder the direct use of raw CBCT for dose recalculation during treatment. To address this issue, reliable correction techniques are necessary to remove artifacts and remap pixel intensity into HU values. This study proposes a deep-learning framework for calibrating CBCT images acquired with narrow FOV systems and demonstrates its potential use in proton treatment planning updates. Cycle-consistent GAN processes raw CBCT to reduce scatter and remap HU. Monte Carlo simulation is used to generate CBCT scans, enabling the possibility to focus solely on the algorithm’s ability to reduce artifacts and cupping effects without considering intra-patient longitudinal variability and producing a fair comparison between planning CT and calibrated CBCT dosimetry. To showcase the viability of the approach using real-world data, experiments were also conducted using real CBCT. Tests were performed on a publicly available dataset of 40 patients who received ablative radiation therapy for pancreatic cancer. The simulated CBCT calibration led to a difference in proton dosimetry of less than 2%, compared to the planning CT. The potential toxicity effect on the organs at risk decreased from about 50% (uncalibrated) up the 2% (calibrated). The gamma pass rate at 3%/2mm produced an improvement of about 37% in replicating the prescribed dose before and after calibration (53.78% vs 90.26%). Real data also confirmed this with slightly inferior performances for the same criteria (65.36% vs 87.20%). These results may confirm that generative artificial intelligence brings the use of narrow FOV CBCT scans incrementally closer to clinical translation in proton therapy planning updates.
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