Microbial mats are complex, micro-scale ecosystems that can be found in a wide range of environments. In the top layer of photosynthetic mats from hypersaline environments, a large diversity of cyanobacteria typically predominates. With the aim of strengthening the knowledge on the cyanobacterial diversity present in the coastal lagoon system of Araruama (state of Rio de Janeiro, Brazil), we have characterized three mat samples by means of a polyphasic approach. We have used morphological and molecular data obtained by culture-dependent and -independent methods. Moreover, we have compared different classification methodologies and discussed the outcomes, challenges, and pitfalls of these methods. Overall, we show that Araruama's lagoons harbor a high cyanobacterial diversity. Thirty-six unique morphospecies could be differentiated, which increases by more than 15% the number of morphospecies and genera already reported for the entire Araruama system. Morphology-based data were compared with the 16S rRNA gene phylogeny derived from isolate sequences and environmental sequences obtained by PCR-DGGE and pyrosequencing. Most of the 48 phylotypes could be associated with the observed morphospecies at the order level. More than one third of the sequences demonstrated to be closely affiliated (best BLAST hit results of ≥99%) with cyanobacteria from ecologically similar habitats. Some sequences had no close relatives in the public databases, including one from an isolate, being placed as “loner” sequences within different orders. This hints at hidden cyanobacterial diversity in the mats of the Araruama system, while reinforcing the relevance of using complementary approaches to study cyanobacterial diversity.

Clemente, I.M.M.M.; da Silva, F.S.; Laut, L.L.M.; Frontalini, F.; da Costa, V.L.; da Conceiçã o Rodrigues, M.A.; Pereira, E.; Bergamaschi, S.; Filho, J.G.M., and Martins, M.

This work aims to define the factors driving the accumulation of metals in the sediment of the lagoon of Aveiro (Portugal). The role of initial diagenetic processes in controlling trace metal retention in surface sediment is traced by mineralogy, magnetic susceptibility and geochemical analyses. Although several studies have focused on the metal distribution in this polihaline and anthropized coastal lagoon, most of them have been solely focused on the total metal concentrations. This study instead represents the first attempt to evaluate in a vast area of the Aveiro Lagoon the role of biogeochemical processes in metal availability and distribution in three extracted phases: exchangeable cations adsorbed by clay and elements co-precipitated with carbonates (S1), organic matter (S2) and amorphous Mn hydroxides (S3). According to the sediment guideline values, the sediment is polluted by, for instance, As and Hg in the inner area of the Murtosa Channel, Pb in the Espinheiro Channel, Aveiro City canals and Aveiro Harbour, and Zn in the northern area of the Ovar Channel. These sites are located near the source areas of pollutants and have the highest total available concentrations in each extracted phase. The total available concentrations of all toxic metals are however associated, firstly, with the production of amorphous Mn hydroxides in most of the areas and, secondly, with adsorption by organic compounds. The interplay of the different processes implies that not all of the sites near pollution sources have polluted surface sediment. The accumulation of metals depends on not only the pollution source but also the changing in the redox state of the sediments that may cause alterations in the sediment retention or releasing of redox-sensitive metals. Results of this work suggest that the biogeochemical processes may play a significant role in the increase of the pollutants in the sediment of the Aveiro Lagoon.

No abstract

Wide biosurfactant application on biorremediation is limited by its high production cost. The search for cheaper biossurfactant production alternatives has guided our study. The use of selective media containing sucrose (10 g.L -1 ) and Arabian Light oil (2 g.L -1 ) as carbon sources showed to be effective to screen and maintain biosurfactant-producing consortia isolated from mangrove hydrocarbon-contaminated sediment. The biosurfactant production was assayed by kerosene, gasoline and Arabian Light Emulsification activity and the bacterial growth curve was determined by bacterial quantification. The parameters analyzed for biosurfactant production were the growth curve, salinity concentration, flask shape and oxygenation. All bacteria consortia screened were able to emulsify the petroleum derivatives tested. Biosurfactant production increased according to the incubation time; however the type of emulsification (non-aqueous phase or aqueous phase) did not change with time but with the compound tested. The methodology was able to isolate biosurfactant-producing consortia from superficial mangrove sediment contaminated by petroleum hydrocarbons and was recommended for selection of biosurfactant producing bacteria in tropical countries with low financial resources.Keywords: bacteria consortia, bioremediation, petroleum, sediment. Metodologia alternativa para isolamento de bactérias produtoras de biossurfactante ResumoA ampla aplicação de biossurfactantes em biorremediação é limitada pelo seu alto custo de produção. A procura de alternativas de produção mais baratas motivou nosso estudo. O uso de meio seletivo, contendo sacarose (10 g.L ), mostrou-se eficiente na triagem e manutenção de consórcios bacterianos isolados de sedimento de mangue contaminado com hidrocarboneto. A produção de biossurfactante foi avaliada pela Atividade Emulsificante do querosene, gasolina e Árabe Leve e a curva de crescimento foi determinada pela quantificação bacteriana. Os parâ-metros analisados para a produção de biossurfactante foram: curva de crescimento, concentração da salinidade, forma do frasco e oxigenação. Todos os consórcios bacterianos pesquisados foram capazes de emulsificar os derivados de petróleo testados. A produção de biossurfactante aumentou de acordo com o tempo de incubação, entretanto, o tipo de emulsificação aquosa e não-aquosa não mudou com o tempo, mas com o composto testado. A metodologia permitiu o isolamento de consórcios bacterianos produtores de biossurfactante de sedimento superficial de mangue contaminado com hidrocarbonetos do petróleo, sendo indicada para seleção de bactéria produtora de biossurfactante em países tropicais com baixos recursos financeiros.Palavras-chave: consórcio bacteriano, biorremediação, petróleo, sedimento.

Data on lipids, carbohydrates and proteins of the most expressive black shale (s.l.) intervals of the Early-Late Pliensbachian (Early Jurassic,~187 Ma) organic-rich hemipelagic series of the Lusitanian Basin (Portugal) were determined using a method that has been successfully applied over the last two decades in the characterization of biomass and very immature sediments. The goal of this paper is to test the applicability of these techniques to the ancient geological record. To our knowledge, this is the first time that this type of biogeochemical data from sedimentary series older than Oligocene is reported and tentatively used for palaeoenvironmental/diagenetic inferences. Carbohydrates and proteins are present in low concentrations, reaching up to 385.13 and 451.13 μg/g rock, respectively. The main variations are observed in the lipid contents, ranging from 197.67 to 8446.36 μg/g rock. The samples with the highest amounts of lipids seem to correlate with low [O 2 ] time intervals determined by independent data, such as organic petrography, micropalaeontology and sedimentology. This was probably related with selective lipid preservation under oxygen and hydrogen sulfide-rich depleted environments. The good overall match between the determined lipid contents and specific depositional/early diagenetical conditions seem to favor the idea that the easy to perform and inexpensive method applied here has the potential to add useful information to the study of ancient organic-rich carbonate sedimentary series.

No abstract

No abstract