A very simple self-assembling system, which produces inclusion complexes with pseudorotaxane geometries, is described. The self-assembly of eight pseudorotaxanes with a range of stoichiometries-I : I , 1 :2, 2:1, and 2:2 (host:guest)-has been Keywords achieved. These pseudorotaxanes self-assemble from readily available componentscrown ethers -dialkylammonium well-known crown ethers, such as dibenzo [24]crown-8 and bis-p-phenylene[34lcrown-salts 9 hydrogen bonding -molecular 10, and secondary dialkylammonium hexafluorophosphate salts, such as (PhCH,),-recognition -pseudorotaxanes * NHiPF; and (nBu),NHlPF;-and have been characterized not only in the solid state, self-assembly but also in solution and in the "gas phase". The pseudorotaxanes are stabilized largely by hydrogen-bonding interactions and, in some instances, by aryl-aryl interactions.

A simple motif for molecular recognition—the binding of disubstituted ammonium salts, for example dibenzyl‐ and di‐n‐butylammonium hexaflurophosphate, with crown ethers like dibenzo[24]crown‐8—results in the self‐assembly of threaded 1:1 complexes 1. The superstructures of these complexes are stabilized by hydrogen bonds, electrostatic pole–dipole interactions, and dispersive interactions.

Neutral organic electron-donor 7, formally a pyridinylidene carbene dimer, effects reductive cleavage of C-O sigma-bonds in acyloin derivatives Ar(CO)CRR'OX (X = OAc, OPiv, OBz, OMs) and this represents the first cleavage of C-O sigma-bonds by a neutral organic electron-donor. The methodology is applicable to a large array of substrates and the reduced counterparts were isolated in good to excellent yields. For certain substrates, donor 7 behaves as a base, effecting condensation reactions with some acetate ester derivatives of acyloins, leading to butenolides. The variation in reactivity among the different substrates was rationalized.

Template-directed synthesis has been used to construct a [2]catenane in which the two molecular components, the cyclobis(paraquat-p-phenylene) tetracation and 1,5-dinaphtho-38-crown-10, are found to be ordered non-covalently with respect to each other in both the solid (by X-ray crystallography) and solution (by NMR spectroscopy) states and to influence each other to the extent of establishing electrochemical gradients for the stepwise one electron reductions of the two paraquat units.

The enzyme porphobilinogen deaminase (PBGD; hydroxymethylbilane synthase; EC 2.5.1.61) catalyses a key early step of the haem- and chlorophyll-biosynthesis pathways in which four molecules of the monopyrrole porphobilinogen are condensed to form a linear tetrapyrrole. The active site possesses an unusual dipyrromethane cofactor which is extended during the reaction by the sequential addition of the four substrate molecules. The cofactor is linked covalently to the enzyme through a thioether bridge to the invariant Cys254. Until recently, structural data have only been available for the Escherichia coli and human forms of the enzyme. The expression of a codon-optimized gene for PBGD from Arabidopsis thaliana (thale cress) has permitted for the first time the X-ray analysis of the enzyme from a higher plant species at 1.45 Å resolution. The A. thaliana structure differs appreciably from the E. coli and human forms of the enzyme in that the active site is shielded by an extensive well defined loop region (residues 60-70) formed by highly conserved residues. This loop is completely disordered and uncharacterized in the E. coli and human PBGD structures. The new structure establishes that the dipyrromethane cofactor of the enzyme has become oxidized to the dipyrromethenone form, with both pyrrole groups approximately coplanar. Modelling of an intermediate of the elongation process into the active site suggests that the interactions observed between the two pyrrole rings of the cofactor and the active-site residues are highly specific and are most likely to represent the catalytically relevant binding mode. During the elongation cycle, it is thought that domain movements cause the bound cofactor and polypyrrole intermediates to move past the catalytic machinery in a stepwise manner, thus permitting the binding of additional substrate moieties and completion of the tetrapyrrole product. Such a model would allow the condensation reactions to be driven by the extensive interactions that are observed between the enzyme and the dipyrromethane cofactor, coupled with acid-base catalysis provided by the invariant aspartate residue Asp95.