The classification of the legume family proposed here addresses the long‐known non‐monophyly of the traditionally recognised subfamily Caesalpinioideae, by recognising six robustly supported monophyletic subfamilies. This new classification uses as its framework the most comprehensive phylogenetic analyses of legumes to date, based on plastid matK gene sequences, and including near‐complete sampling of genera (698 of the currently recognised 765 genera) and ca. 20% (3696) of known species. The matK gene region has been the most widely sequenced across the legumes, and in most legume lineages, this gene region is sufficiently variable to yield well‐supported clades. This analysis resolves the same major clades as in other phylogenies of whole plastid and nuclear gene sets (with much sparser taxon sampling). Our analysis improves upon previous studies that have used large phylogenies of the Leguminosae for addressing evolutionary questions, because it maximises generic sampling and provides a phylogenetic tree that is based on a fully curated set of sequences that are vouchered and taxonomically validated. The phylogenetic trees obtained and the underlying data are available to browse and download, facilitating subsequent analyses that require evolutionary trees. Here we propose a new community‐endorsed classification of the family that reflects the phylogenetic structure that is consistently resolved and recognises six subfamilies in Leguminosae: a recircumscribed Caesalpinioideae DC., Cercidoideae Legume Phylogeny Working Group (stat. nov.), Detarioideae Burmeist., Dialioideae Legume Phylogeny Working Group (stat. nov.), Duparquetioideae Legume Phylogeny Working Group (stat. nov.), and Papilionoideae DC. The traditionally recognised subfamily Mimosoideae is a distinct clade nested within the recircumscribed Caesalpinioideae and is referred to informally as the mimosoid clade pending a forthcoming formal tribal and/or clade‐based classification of the new Caesalpinioideae. We provide a key for subfamily identification, descriptions with diagnostic charactertistics for the subfamilies, figures illustrating their floral and fruit diversity, and lists of genera by subfamily. This new classification of Leguminosae represents a consensus view of the international legume systematics community; it invokes both compromise and practicality of use.
The field of molecular plant phylogenetics has had tremendous impacts on botanical studies and taxonomic classification, macroevolution and biogeography, ever since the pioneering studies of Chase et al. (1993) based on DNA sequence data. While those early studies used just a single locus, the plastid gene rbcL, modern studies often employ hundreds to several thousands of genes to infer phylogenetic relationships (e.g.,
We reconstructed phylogenetic relationships in Leguminosae subfam. Mimosoideae tribe Ingeae using 135 sequences from the nuclear (ITS) and 119 from the plastid (trnL–F) genome, representing 23 of the 36 currently recognized genera in the tribe with newly generated sequences of Blanchetiodendron, Guinetia, Macrosamanea, Thailentadopsis and Viguieranthus and an extensive sampling of Calliandra. Only two of the five Neotropical generic alliances of Barneby & Grimes (1996) were supported as monophyletic. Calliandra is resolved as monophyletic with the inclusion of Guinetia. The five previously proposed sections within Calliandra were not supported by our study. Nevertheless, based on these results, a new infrageneric classification is proposed for Calliandra, and the African species of the genus are assigned to a new genus, Afrocalliandra. Three new sections are proposed for Calliandra: (1) sect. Tsugoideae based on C. ser. Tsugoideae, with four species from northwestern South America; (2) sect. Septentrionales, with six species distributed in dry areas from the United States to Mexico and (3) sect. Monticola, which consists of species restricted to the Espinhaço range of Brazil; these latter species form a clade with low levels of sequence variation, a potential indicator of the recent diversification of this group.
(2013). Legume phylogeny and classification in the 21st century: progress, prospects and lessons for other species-rich clades. Taxon, 62(2):217-248. LPWG • Legume phylogeny and classificationTAXON 62 (2) •
Whatever criteria are used to measure evolutionary success -species numbers, geographic range, ecological abundance, ecological and life history diversity, background diversification rates, or the presence of rapidly evolving clades -the legume family is one of the most successful lineages of flowering plants. Despite this, we still know rather little about the dynamics of lineage and species diversification across the family through the Cenozoic, or about the underlying drivers of diversification. There have been few attempts to estimate net species diversification rates or underlying speciation and extinction rates for legume clades, to test whether among-lineage variation in diversification rates deviates from null expectations, or to locate species diversification rate shifts on specific branches of the legume phylogenetic tree. In this study, time-calibrated phylogenetic trees for a set of species-rich legume clades -Calliandra, Indigofereae, Lupinus, Mimosa and Robinieae -and for the legume family as a whole, are used to explore how we might approach these questions. These clades are analysed using recently developed maximum likelihood and Bayesian methods to detect species diversification rate shifts and test for among-lineage variation in speciation, extinction and net diversification rates. Possible explanations for rate shifts in terms of extrinsic factors and/or intrinsic trait evolution are discussed. In addition, several methodological issues and limitations associated with these analyses are highlighted emphasizing the potential to improve our understanding of the evolutionary dynamics of legume diversification by using much more densely sampled phylogenetic trees that integrate information across broad taxonomic, geographical and temporal levels.
The widest historical circumscription of the mimosoid legume genus Piptadenia (Caesalpinioideae: mimosoid clade) previously embraced morphologically disparate species that are currently ascribed to nine different genera. Previous molecular phylogenetic studies have demonstrated that the neotropical dry forest Piptadenia viridiflora is not closely related to Piptadenia s.str. Here we plug gaps in the DNA sequence dataset of a recently published study to build a more comprehensive phylogeny of the Piptadenia group and revise morphological evidence to define the phylogenetic relationship of P. viridiflora. Both morphological and molecular data confirm that P. viridiflora is an isolated lineage, thus warranting the description of the new monospecific genus Lachesiodendron. The new genus is diagnosed by the combination of paired stipular spines (vs. stipules not modified into spines in Piptadenia s.str.), prickles absent (vs. present), flowers in axillary spikes not grouped in compound inflorescences (vs. spikes grouped in compound pseudoracemes or panicles), flowers with a cylindrical corolla long exserted from the calyx (vs. corolla campanulate with petals free or slightly joined at the base) and long green stamens (vs. shorter and white, pale yellow or pink stamens). In addition, Lachesiodendron has pollen aggregated into 8–celled polyads with a hamulate exine, which further contrasts with the 12–celled polyads with a psilate exine in Piptadenia s.str.
The shortage of reliable primary taxonomic data limits the description of biological taxa and the understanding of biodiversity patterns and processes, complicating biogeographical, ecological, and evolutionary studies. This deficit creates a significant taxonomic impediment to biodiversity research and conservation planning. The taxonomic impediment and the biodiversity crisis are widely recognized, highlighting the urgent need for reliable taxonomic data. Over the past decade, numerous countries worldwide have devoted considerable effort to Target 1 of the Global Strategy for Plant Conservation (GSPC), which called for the preparation of a working list of all known plant species by 2010 and an online world Flora by 2020. Brazil is a megadiverse country, home to more of the world's known plant species than any other country. Despite that, Flora Brasiliensis, concluded in 1906, was the last comprehensive treatment of the Brazilian flora. The lack of accurate estimates of the number of species of algae, fungi, and plants occurring in Brazil contributes to the prevailing taxonomic impediment and delays progress towards the GSPC targets. Over the past 12 years, a legion of taxonomists motivated to meet Target 1 of the GSPC, worked together to gather and integrate knowledge on the algal, plant, and fungal diversity of Brazil. Overall, a team of about 980 taxonomists joined efforts in a highly collaborative project that used cybertaxonomy to prepare an updated Flora of Brazil, showing the power of scientific collaboration to reach ambitious goals. This paper presents an overview of the Brazilian Flora 2020 and provides taxonomic and spatial updates on the algae, fungi, and plants found in one of the world's most biodiverse countries. We further identify collection gaps and summarize future goals that extend beyond 2020. Our results show that Brazil is home to 46,975 native species of algae, fungi, and plants, of which 19,669 are endemic to the country. The data compiled to date suggests that the Atlantic Rainforest might be the most diverse Brazilian domain for all plant groups except gymnosperms, which are most diverse in the Amazon. However, scientific knowledge of Brazilian diversity is still unequally distributed, with the Atlantic Rainforest and the Cerrado being the most intensively sampled and studied biomes in the country. In times of “scientific reductionism”, with botanical and mycological sciences suffering pervasive depreciation in recent decades, the first online Flora of Brazil 2020 significantly enhanced the quality and quantity of taxonomic data available for algae, fungi, and plants from Brazil. This project also made all the information freely available online, providing a firm foundation for future research and for the management, conservation, and sustainable use of the Brazilian funga and flora.
-(Two new species of Calliandra Benth. (Leguminosae-Mimosoideae) from the Chapada Diamantina, Bahia, Brazil). Two new species of Calliandra are described from the Chapada Diamantina, state of Bahia, eastern Brazil. Calliandra geraisensis E.R. Souza & L.P. Queiroz is related to C. calycina Benth. but it differs in its depauperate habit, distichous leaves and absence of glandular trichomes on the perianth. Calliandra imbricata E.R. Souza & L.P. Queiroz is a shrubby plant similar to C. erubescens Renvoize from which it differs by having the leaves with more pinnae and more leaflets and by its red stamens. Both species occur in the mountains of the Chapada Diamantina region and are narrow endemics from a small area near the town of Piatã.
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