Abstract. Shade trees reduce the stress of coffee (Coffea spp.) and cacao (Theobroma cacao) by ameliorating adverse climatic conditions and nutritional imbalances, but they may also compete for growth resources. For example, shade trees buffer high and low temperature extremes by as much as 5 oc and can produce up to 14 Mg ha-1 yr-1 of litterfall and pruning residues, containing up to 340 kg N ha-1 yr-1 • However, N 2 fixation by leguminous shade trees grown at a density of 100 to 300 trees ha-1 may not exceed 60 kg N ha-1 yr-1 • Shade tree selection and management are potentially important tools for integrated pest management because increased shade may increase the incidence of some commercially important pests and diseases (such as Phythphora palmivora and Mycena citricolor) and decrease the incidence of others (such as Colletotrichum gloeosporioides and Cercospora coffeicola). In Central America, merchantable timber production from commercially important shade tree species, such as Cordia alliodora, is in the range of 4-6 m 3 ha-1 yr-1 _ The relative importance and overall effect of the different interactions between shade trees and coffee/cacao are dependent upon site conditions (soil/climate), component selection (species/varieties/provenances), belowground and aboveground characteristics of the trees and crops, and management practices. On optimal sites, coffee can be grown without shade using high agrochemical inputs. However, economic evaluations, which include off-site impacts such as ground water contamination, are needed to judge the desirability of this approach. Moreover, standard silvicultural practices for closed plantations need to be adapted for open-grown trees within coffee/cacao plantations.

Biodiversity continues to decline in the face of increasing anthropogenic pressures such as habitat destruction, exploitation, pollution and introduction of alien species. Existing global databases of species’ threat status or population time series are dominated by charismatic species. The collation of datasets with broad taxonomic and biogeographic extents, and that support computation of a range of biodiversity indicators, is necessary to enable better understanding of historical declines and to project – and avert – future declines. We describe and assess a new database of more than 1.6 million samples from 78 countries representing over 28,000 species, collated from existing spatial comparisons of local-scale biodiversity exposed to different intensities and types of anthropogenic pressures, from terrestrial sites around the world. The database contains measurements taken in 208 (of 814) ecoregions, 13 (of 14) biomes, 25 (of 35) biodiversity hotspots and 16 (of 17) megadiverse countries. The database contains more than 1% of the total number of all species described, and more than 1% of the described species within many taxonomic groups – including flowering plants, gymnosperms, birds, mammals, reptiles, amphibians, beetles, lepidopterans and hymenopterans. The dataset, which is still being added to, is therefore already considerably larger and more representative than those used by previous quantitative models of biodiversity trends and responses. The database is being assembled as part of the PREDICTS project (Projecting Responses of Ecological Diversity In Changing Terrestrial Systems – http://www.predicts.org.uk). We make site-level summary data available alongside this article. The full database will be publicly available in 2015.

The PREDICTS project—Projecting Responses of Ecological Diversity In Changing Terrestrial Systems (www.predicts.org.uk)—has collated from published studies a large, reasonably representative database of comparable samples of biodiversity from multiple sites that differ in the nature or intensity of human impacts relating to land use. We have used this evidence base to develop global and regional statistical models of how local biodiversity responds to these measures. We describe and make freely available this 2016 release of the database, containing more than 3.2 million records sampled at over 26,000 locations and representing over 47,000 species. We outline how the database can help in answering a range of questions in ecology and conservation biology. To our knowledge, this is the largest and most geographically and taxonomically representative database of spatial comparisons of biodiversity that has been collated to date; it will be useful to researchers and international efforts wishing to model and understand the global status of biodiversity.

Addressing the global challenges of climate change, food security, and poverty alleviation requires enhancing the adaptive capacity and mitigation potential of agricultural landscapes across the tropics. However, adaptation and mitigation activities tend to be approached separately due to a variety of technical, political, financial, and socioeconomic constraints. Here, we demonstrate that many tropical agricultural systems can provide both mitigation and adaptation benefits if they are designed and managed appropriately and if the larger landscape context is considered. Many of the activities needed for adaptation and mitigation in tropical agricultural landscapes are the same needed for sustainable agriculture more generally, but thinking at the landscape scale opens a new dimension for achieving synergies. Intentional integration of adaptation and mitigation activities in agricultural landscapes offers significant benefits that go beyond the scope of climate change to food security, biodiversity conservation, and poverty alleviation. However, achieving these objectives will require transformative changes in current policies, institutional arrangements, and funding mechanisms to foster broad-scale adoption of climate-smart approaches in agricultural landscapes.

Habitat loss is the primary driver of biodiversity decline worldwide, but the effects of fragmentation (the spatial arrangement of remaining habitat) are debated. We tested the hypothesis that forest fragmentation sensitivity—affected by avoidance of habitat edges—should be driven by historical exposure to, and therefore species’ evolutionary responses to disturbance. Using a database containing 73 datasets collected worldwide (encompassing 4489 animal species), we found that the proportion of fragmentation-sensitive species was nearly three times as high in regions with low rates of historical disturbance compared with regions with high rates of disturbance (i.e., fires, glaciation, hurricanes, and deforestation). These disturbances coincide with a latitudinal gradient in which sensitivity increases sixfold at low versus high latitudes. We conclude that conservation efforts to limit edges created by fragmentation will be most important in the world’s tropical forests.

In order to explore the importance of indigenous agroforestry systems for biodiversity conservation, we compared the abundance, species richness and diversity of dung beetles and terrestrial mammals across a gradient of different land use types from agricultural monocultures (plantains) to agroforestry systems (cocoa and banana) and forests in the BriBri and Cabe´car indigenous reserves in Talamanca, Costa Rica. A total of 132,460 dung beetles of 52 species and 913 tracks of 27 terrestrial mammal species were registered. Dung beetle species richness and diversity were greatest in the forests, intermediate in the agroforestry systems and lowest in the plantain monocultures, while dung beetle abundance was greatest in the plantain monocultures. The number of mammal tracks per plot was significantly higher in forests than in plantain monocultures, whereas mammal species richness was higher in forests than in either cocoa agroforestry systems or plantain monocultures. Species composition of both terrestrial mammals and dung beetles also varied across the different land use types. Our study indicates that indigenous cocoa and banana agroforestry systems maintain an intermediate level of biodiversity (which is less than that of the original forest but significantly greater than that of plantain monocultures) and provide suitable habitat for a number of forest-dependent species. Although the agroforestry systems appear to serve as favorable habitats for many terrestrial mammal species, their potential positive contribution to mammal conservation is being offset by heavy hunting pressure in the reserves. As in other agricultural landscapes, the conservation of biodiversity in Talamanca will depend not only on maintaining the existing forest patches and reducing the conversion of traditional agroforestry systems to monocultures, but also on reducing hunting pressure.

No abstract

No abstract