An NIR-emitting probe (λem~700 nm) with a large Stokes shift (Δλ≈234 nm) is synthesized by using excited-state intramolecular proton transfer (ESIPT). The phenolic proton, which controls ESIPT, acts as a switch to give strong fluorescence at pH≈5. The probe can selectively show lysosome organelles, therefore leading to a lysosome probe without exhibiting “an alkalinizing effect”.

In this review, we will summarize our recent progress in the design and application of novel organic sensors with emission in the near-infrared region (600–900 nm). By coupling different functional groups with excited-state intramolecular proton transfer (ESIPT) segments, new probes are developed to achieve a large Stokes shift, high sensitivity, and selectivity and to tune the emission toward the near-infrared region. The developed probes exhibit attractive optical properties for bioimaging and environmental science applications. In addition, we further discuss the photophysical properties of ESIPT dyes and how their fluorescence could be affected by structural/environmental factors, which should be considered during the development of robust ESIPT-based fluorescence probes. Their potential applications as imaging reagents are illustrated for intracellular membranes, mitochondria, lysosomes, and some biomolecules.

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Tracking the viral progression of SARS-CoV-2 in COVID-19 infected body tissues is an emerging need of the current pandemic. Imaging at near infrared second biological window (NIR-II) offers striking benefits...

Lysosome imaging without perturbing intracellular activity remains challenging, as the current commercial lysosome probes contain weakly basic amino groups that could perturb lysosome pH. Herein, we illustrate NIR-emitting dyes 2 and 3 (λ em ≈ 700 nm) with very large Stokes' shifts (Δλ = 231−246 nm), attributing to the presence of a 2-hydroxyphenyl(benzo[d]oxazol) (HBO) unit that undergoes excited-state intramolecular proton transfer (ESIPT). The structures of 2 and 3 also contain a hemicyanine unit with benzothiazolium and indolium as a terminal group, respectively. Although the fluorescent probe 2 (Φ fl ≈ 0.28−0.35 in CH 2 Cl 2 ) does not contain any basic amino functional group, it exhibits excellent selectivity for staining intracellular lysosomes, showing the potential for long-term in vivo lysosome imaging without "alkalinizing effect." However, probe 3 (Φ fl ≈ 0.27, in CH 2 Cl 2 ) exhibits excellent selectivity toward mitochondria. The observation showed that the terminal group in the hemicyanine unit played an essential role in guiding the intracellular selectivity to different organelles. In addition, the probes also displayed a transparent optical window between 520 and 590 nm, which is useful to achieve multicolor co-staining study, without fluorescence crosstalk that is a common problem on fluorescence microscopes.

A few HBT-Cy-containing fluorescent probes have been synthesized for lysosome visualization in live cells.

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The unusual large bathochromic shift from a novel near-infrared (NIR)-emitting molecule, 2-[3-(benzo[d]thiazol-2-yl)-2-hydroxy-5-methylstyr-yl]-3-ehtylbenzo[d]thiazol-3-ium iodide (named cyanine 1) with combination of intramolecular charge transfer (ICT) and intramolecular proton transfer (IPT) process in one molecular framework, is systematically investigated using ultrafast transient absorption (TA) spectroscopy and quantum chemical calculations. In order to understand the synergetic coupling effect of the excited state intramolecular proton/charge transfers (ESIPT/ESICT) for the intense near-infrared emission of cyanine 1, an analogue non-ESIPT molecule, 2-[5-(benzo[d]thiazol-2-yl)-2-hydroxystyryl]-3-ehtylbenzo[d]thiazol-3-ium iodide (named cyanine 2) has also been investigated as comparison. Steady-state spectra and theoretical calculations suggest that the large Stokes shift and high fluorescence quantum yield in cyanine 1 originate from the ultrafast ESIPT, which leads to the efficient extension of π-conjugation in the molecular backbone in its excited states. Femtosecond transient absorption spectra further confirm above-mentioned conclusion that an extremely fast ESIPT process occurs in cyanine 1 upon excitation, followed by a solvent reorganization process (ca. 1.5 ps). This solvation is obviously slower compared to cyanine 2 (ca. 0.8 ps), indicating the extent of ESICT concerned ESIPT in keto* form of cyanine 1 is slightly weaker than that of ESICT in cyanine 2, where the fast ESIPT plays an important role in extending the efficient π-conjugation in the molecular backbone by adjusting the electronic charge distribution in keto* form. Such an effect can reduce the radiationless transition due to weak solvation process in keto* form, and then promotes the quantum yield of the large red-shifted fluorescence in cyanine 1.