Mitochondrial DNA (mtDNA) haplotypes were determined using restriction fragment length polymorphism (RFLP) for P. infestans sampled from 513 foliar lesions of late blight found on potato and tomato in different regions of Ethiopia. Among the four reported mitochondrial haplotypes of Phytophthora infestans, Ia, Ib and IIb were detected in 93 % of the samples analyzed but the vast majority of these were Ia. The remaining 7 % represented a previously unreported haplotype. DNA sequencing of this new haplotype also confirmed a single base nucleotide substitution that resulted in loss of EcoRI restriction site and gain of two additional MspI sites in cox1 and atp1 genes, respectively. There were 28 polymorphic sites among all nucleotide sequences including five reference isolates. Sites with alignment gaps were observed in P4 with one nucleotide deletion in 11 Ethiopian isolates. None of the reference sequence produced frame-shifts, with the exception of the 3-nucleotide deletion in the P4 region by Phytophthora andina, a feature that can be used to distinguish the new Ethiopian isolates from P. andina. While a distinguishing molecular data presented here clearly separated them from P. infestans, 7 % of the isolates that share this feature formed an important component of the late blight pathogen causing disease on Solanum tuberosum in Ethiopia. Thus, these Ethiopian isolates could represent a novel Phytophthora species reported for the first time here.
Stem rust caused by Puccinia graminis f. sp. tritici (Pgt) is one of the most important diseases of wheat worldwide. Breeding for resistance to diseases is the most important approach for mitigation of yield losses. This study was conducted to estimate the diversity of all stage stem rust resistance (ASR) genes on the 142 durum wheat landrace accessions at seedling stage. The study was conducted in greenhouse at Ambo Plant Protection Research Center on the 142 durum wheat landrace accessions using 20 differential lines, one susceptible line (McNair), and eight Pgt races. The result depicted the presence of Sr7b, Sr8a, Sr9b, Sr10, Sr11, Sr13, Sr17, Sr30, Sr31, Sr36, and SrTmp in the Ethiopian durum wheat accessions. Among the 142 durum wheat accessions, 83 accessions were identified for possessing single ASR genes, and four accessions including the universal susceptible line (McNair) did not have effective resistance genes to the pathogen races tested in this study. The remaining 55 accessions had either a combination of two resistance genes, unknown number and kind of genes, or unidentified genes displaying resistance across all the pathogen races. This study demonstrated the prevalence of significant genetic diversity for stem rust ASR genes in the Ethiopian durum wheat landraces.
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