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This study records and documents the most severe and notable instance ever reported of sudden and widespread dieback of mangrove vegetation. Between late 2015 and early 2016, extensive areas of mangrove tidal wetland vegetation died back along 1000km of the shoreline of Australia’s remote Gulf of Carpentaria. The cause is not fully explained, but the timing was coincident with an extreme weather event; notably one of high temperatures and low precipitation lacking storm winds. The dieback was severe and widespread, affecting more than 7400ha or 6% of mangrove vegetation in the affected area from Roper River estuary in the Northern Territory, east to Karumba in Queensland. At the time, there was an unusually lengthy period of severe drought conditions, unprecedented high temperatures and a temporary drop in sea level. Although consequential moisture stress appears to have contributed to the cause, this occurrence was further coincidental with heat-stressed coral bleaching. This article describes the effect and diagnostic features of this severe dieback event in the Gulf, and considers potential causal factors.

Invasive species pose a major threat to aquatic ecosystems. Their impact can be particularly severe in tropical regions, like those in northern Australia, where >20 invasive fish species are recorded. In temperate regions, environmental DNA (eDNA) technology is gaining momentum as a tool to detect aquatic pests, but the technology's effectiveness has not been fully explored in tropical systems with their unique climatic challenges (i.e. high turbidity, temperatures and ultraviolet light). In this study, we modified conventional eDNA protocols for use in tropical environments using the invasive fish, Mozambique tilapia (Oreochromis mossambicus) as a detection model. We evaluated the effects of high water temperatures and fish density on the detection of tilapia eDNA, using filters with larger pores to facilitate filtration. Large-pore filters (20 μm) were effective in filtering turbid waters and retaining sufficient eDNA, whilst achieving filtration times of 2-3 min per 2-L sample. High water temperatures, often experienced in the tropics (23, 29, 35 °C), did not affect eDNA degradation rates, although high temperatures (35 °C) did significantly increase fish eDNA shedding rates. We established a minimum detection limit for tilapia (1 fish/0.4 megalitres/after 4 days) and found that low water flow (3.17 L/s) into ponds with high fish density (>16 fish/0.4 megalitres) did not affect eDNA detection. These results demonstrate that eDNA technology can be effectively used in tropical ecosystems to detect invasive fish species.

Northern Australia is biologically diverse and of national and global conservation signicance. Its ancient landscape contains the world's largest area of savannah ecosystem in good ecological condition and its rivers are largely free-flowing. Agriculture, previously confined largely to open range-land grazing, is set to expand in extent and to focus much more on irrigated cropping and horticulture. Demands on the water resources of the region are thus, inevitably increasing. Reliable information is required to guide and inform development and help plan for a sustainable future for the region which includes healthy rivers that contain diverse fish assemblages. Based on a range of information sources, including the outcomes of recent and extensive new field surveys, this study maps the distribution of the 111 freshwater fishes (excluding elasmobranches) and 42 estuarine vagrants recorded from freshwater habitats of the region. We classify the habitat use and migratory biology of each species. This study provides a comprehensive assessment of the diversity and distribution of fishes of the region within a standardised nomenclatural framework. In addition, we summarise the outcomes of recent phylogeographic and phylogenetic research using molecular technologies to identify where issues of taxonomy may need further scrutiny. The study provides an informed basis for further research on the spatial arrangement of biodiversity and its relationship to environmental factors (e.g. hydrology), conservation planning and phylogentic variation within individual taxa.

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Despite the growing recognition of the contribution that indigenous ecological knowledge (IEK) can make to contemporary 'western' science-based natural resource management (NRM), integration of the two knowledge systems has not reached its full potential in Australia. One explanation is that there is an implicit requirement for IEK to be validated by western scientific knowledge (SK), which has stalled its application and perpetuated the primacy of SK over IEK. Consequently, there is little experience of IEK validation, indigenous peoples' perspectives of the process, and no formal frameworks to achieve mutual and equitable validation of both IEK and SK. In this paper we assess the opportunities and limitations of validation processes using a case study of traditional fishing poisons for invasive fish management in the Wet Tropics World Heritage Area of Australia. The study was conducted within a coresearch approach between the Aboriginal holders of the IEK, who are among the paper's authors, and science-based biologists. We jointly carried out scientific laboratory trials that demonstrated that fishing poisons are effective at immobilizing invasive tilapia. Retrospective interviews with indigenous coresearchers showed that they did not find the experience of validation disrespectful, but instead empowering and necessary for their IEK to be understood and appreciated by scientists and included in NRM. Based on our experiences and knowledge of socialization theory we present a framework for the potential future design of collaborative validation processes to facilitate the integration of IEK into mainstream NRM, and the acceptance of SK within indigenous communities in Australia

The diets of 21 terapontid species from freshwater environments in northern Australia were investigated to determine the similarity and dissimilarity among species and the extent of any ontogenetic shifts. Distinct ontogenetic dietary shifts occurred in all species for which sufficient data were available, with many species passing through several discrete trophic categories during their life histories. Diets of all juvenile terapontids were similar, mainly comprising aquatic insects and zooplankton. Larger size classes of terapontids diverged into a broad spectrum of feeding groups comprising carnivorous dietary modes (including piscivory and lepidophagy), omnivory (including frugivory and consumption of allochthonous prey), herbivory and detritivory. The results indicate that the terapontids represent Australia's most trophically diverse freshwater fish family.

Hydrological changes associated with irrigation, in conjunction with increased nutrient concentrations and aquatic plant densities, have greatly impacted fish habitat values on the Burdekin River floodplain. The two most significant weeds in the Burdekin floodplain are water hyacinth (Eichhornia crassipes) and para grass (Urochloa mutica). Water hyacinth creates a base for the para grass (and then other weeds) to grow out into deeper water, creating weed mats that can then only be removed by mechanical means or floods of the largest magnitude. We attempted to rehabilitate floodplain lagoons by the mechanical removal of floating weed mats and monitored the result by measuring the subsequent effects on fish habitats and fish communities. Prior to weed removal, fish habitats were generally of poor quality, and fish community structure was skewed away from rich native assemblages to depauperate communities dominated in some instances by alien species. Poor water quality arising from floating weed mats is considered to be the main determinant of reduced fish abundance and diversity. After mechanical weed removal, recovery of water quality and physical habitat led to the re-establishment of many native fish species. Key refuge habitats within the distribution channels were a critical source of recruits for fishes dispersing during times of elevated seasonal flows into the newly rehabilitated reaches. This study demonstrates that floating alien weed mats have significant negative effects upon aquatic communities and that mechanical removal of these weed mats (as opposed to chemical removal) results in dramatic improvements in native fish species richness and abundance.