Pre-commercialization studies on environmental biosafety of genetically modified (GM) crops are necessary to evaluate the potential for sexual hybridization with related plant species that occur in the release area. The aim of the study was a preliminary assessment of factors that may contribute to gene flow from sugarcane (Saccharum hybrids) to indigenous relatives in the sugarcane production regions of Mpumalanga and KwaZulu-Natal provinces, South Africa. In the first instance, an assessment of Saccharum wild relatives was conducted based on existing phylogenies and literature surveys. The prevalence, spatial overlap, proximity, distribution potential, and flowering times of wild relatives in sugarcane production regions based on the above, and on herbaria records and field surveys were conducted for Imperata, Sorghum, Cleistachne, and Miscanthidium species. Eleven species were selected for spatial analyses based on their presence within the sugarcane cultivation region: four species in the Saccharinae and seven in the Sorghinae. Secondly, fragments of the nuclear internal transcribed spacer (ITS) regions of the 5.8s ribosomal gene and two chloroplast genes, ribulose-bisphosphate carboxylase (rbcL), and maturase K (matK) were sequenced or assembled from short read data to confirm relatedness between Saccharum hybrids and its wild relatives. Phylogenetic analyses of the ITS cassette showed that the closest wild relative species to commercial sugarcane were Miscanthidium capense, Miscanthidium junceum, and Narenga porphyrocoma. Sorghum was found to be more distantly related to Saccharum than previously described. Based on the phylogeny described in our study, the only species to highlight in terms of evolutionary divergence times from Saccharum are those within the genus Miscanthidium, most especially M. capense, and M. junceum which are only 3 million years divergent from Saccharum. Field assessment of pollen viability of 13 commercial sugarcane cultivars using two stains, iodine potassium iodide (IKI) and triphenyl tetrazolium chloride, showed decreasing pollen viability (from 85 to 0%) from the north to the south eastern regions of the study area. Future work will include other aspects influencing gene flow such as cytological compatibility and introgression between sugarcane and Miscanthidium species.

Background and Aim: Previous studies recorded the prevalence of gastrointestinal nematodes (GIN) in Limpopo Province. However, the studies did not address the seasonal patterns of infection and did not cover all districts of Limpopo Province, namely; Capricorn, Sekhukhune, Waterberg, Mopani, and Vhembe. It is, therefore, important to provide up to date information on the prevalence and seasonal occurrence data of GIN in all districts of Limpopo province. The present study was conducted to determine the occurrence of anthelmintic resistance (AR) and document the prevalence of GIN infecting sheep in five districts of Limpopo Province, South Africa. Materials and Methods: Forty animals in each district were used for fecal egg count reduction test (FECRT) to determine AR against ivermectin (0.2 mg/kg), levamisole (LEV) (5 mg/kg), and albendazole (7.5 mg/kg). Egg hatch test (EHT) was used to determine AR against thiabendazole (TBZ) and micro-agar larval development test (MALDT) was used for both TBZ and LEV. Naturally, infected sheep (n=780) were sampled for prevalence across five districts of Limpopo. FAMACHA© eye-color score estimations were also performed for each study animal. Results: FECRT showed occurrence of AR in most of the districts and a few with suspected resistance. EHT results showed AR development against TBZ for all districts, while the MALDT showed no AR against LEV in all districts, but detected AR against TBZ in Sekhukhune, Capricorn, and Waterberg. Haemonchus contortus was the most resistant species. A high nematode prevalence (88-100%) and 1210-1861 eggs per gram (EPG) was observed in all districts during the hot wet season, decreasing to 75-80% (453-1202 EPG) during the cold dry season. The sheep revealed a FAMACHA© mean score of 3, indicating mild anemia during the hot wet season except for Vhembe district that revealed a FAMACHA© mean score of 4 during the hot wet season, indicating anemia. Conclusion: AR recorded in Limpopo Province may be due to under-dosing caused by lack of weighing equipment and high treatment frequencies due to lack of proper training on anthelmintic use. The detection of AR in Limpopo is an important finding because it will help in outlining effective management systems against GIN.

Background: Alien Celtis species are commonly cultivated in South Africa. They are easily confused with indigenous C. africana Burm.f. and are often erroneously traded as such. Celtis australis L. is a declared alien invasive tree. Celtis sinensis Pers. is not, but has become conspicuous in urban open spaces.Objectives: This study investigates the extent to which C. sinensis has become naturalised, constructs keys to distinguish between indigenous and cultivated Celtis species, and provides a descriptive treatment of C. sinensis.Methods: Land-cover types colonised by C. sinensis were randomly sampled with 16 belt transects. Woody species were identified, counted and height measured to determine the population structure. C. africana and the three alien Celtis species were cultivated for 2 years and compared morphologically.Results: Celtis sinensis, Ligustrum lucidum and Melia azedarach were found to be alien species, most abundant in urban areas. The population structure of C. sinensis corresponds to that of the declared invasive alien, M. azedarach. Although C. africana occurs naturally, it is not regularly cultivated. This is ascribed to erroneous plantings because of its resemblance to juvenile plants of C. sinensis. Keys are provided to identify Celtis species based on leaf shape and margin, and drupe characters.Conclusion: Celtis sinensis is naturalised in central South Africa, especially in urban open spaces and beginning to colonise natural areas. It is flagged as a species with invasive potential. Characteristics of the leaves and fruits allow for accurate identification of indigenous and alien Celtis species, both as juvenile or adult trees.

Five nickel hyperaccumulators belonging to the Asteraceae are known from ultramafic outcrops in South Africa. Phytoremediation applications of the known hyperaccumulators in the Asteraceae, such as the indigenous Berkheya coddii Roessler, are well reported and necessitate further exploration to find additional species with such traits. This study targeted the most frequently occurring species of the Asteraceae on eight randomly selected serpentinite outcrops of the Barberton Greenstone Belt. Twenty species were sampled, including 12 that were tested for nickel accumulation for the first time. Although the majority of the species were excluders, the known hyperaccumulators Berkheya nivea N.E.Br. and B. zeyheri (Sond. & Harv.) Oliv. & Hiern subsp. rehmannii (Thell.) Roessler var. rogersiana (Thell.) Roessler hyperaccumulated nickel in the leaves at expected levels. A new hyperaccumulator of nickel was discovered, Senecio conrathii N.E.Br., which accumulated the element in its leaves at 1695 ± 637 µg g−1 on soil with a total and exchangeable nickel content of 503 mg kg−1 and 0.095 µg g−1, respectively. This makes it the third known species in the Senecioneae of South Africa to hyperaccumulate nickel after Senecio anomalochrous Hilliard and Senecio coronatus (Thunb.) Harv., albeit it being a weak accumulator compared with the latter. Seven tribes in the Asteraceae have now been screened for hyperaccumulation in South Africa, with hyperaccumulators only recorded for the Arctoteae and Senecioneae. This suggests that further exploration for hyperaccumulators should focus on these tribes as they comprise all six species (of 68 Asteraceae taxa screened thus far) to hyperaccumulate nickel.

Background: Low altitude Mopaneveld savanna in the northeastern parts of South Africa is generally well conserved. However, extensive copper mining, agricultural practices and urbanisation in the Phalaborwa region prompted research on the possible effects of land-use change on plant community diversity and function. Species diversity measures are usually considered adequate to assess disturbance effects to inform conservation efforts and management practices. However, diversity measures based on species level accounts often limit the outcomes of these studies as this approach fails to quantify how disturbances affect ecosystem functioning when community assembly, and not species diversity alone, is altered by land-use change.Objectives: The aim of this study was to apply both species and functional diversity measures to a data set derived from various land-use types (i.e. areas exposed to strip mining activities, communal farming practices and conservation) in the Phalaborwa region to examine the effects of land-use change on the community ecology of the herbaceous layer.Results: Land-use change, particularly severe top-soil disturbances through strip mining activities, had a significant filtering effect on all measures of species diversity, though functional evenness was maintained across land-use types.Conclusion: These results suggest that, despite initial species loss, this particular savanna ecosystem is buffered against anthropogenic disturbances through functional stability. Indicator species analyses, as well as relationships between plant functional types and land-use change, revealed that forb species are largely responsible for ecosystem stability in areas exposed to  anthropogenic disturbances.

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We have used sequence homology searches to identify four novel candidate cystatin genes in soybean (Glycine max var. PAN626) on the basis of sequence homology to a nitric oxide-inducible cystatin (AtCYS1) from Arabidopsis (Arabidopsis thaliana). Semi-quantitative reverse transcription polymerase chain reaction (Semi-qRT-PCR) revealed that expression of these cystatins in soybean is influenced by exogenously applied nitric oxide and a nitric oxide synthase inhibitor. Recombinant protein expression of one of the cystatins (as a glutathione-S-transferase fusion protein) showed that it has inhibitory activity against the model cysteine protease papain but not the model serine protease trypsin and that it inhibits caspase-like activity in soybean nodule extracts. We thus conclude that soybean nitric oxide synthase-like activity regulates the expression of these cystatins, potentially influencing soybean caspase-like activity.Alien invasive plants are non-native, introduced species that invade and transform pristine habitat. They are a threat to the rich biodiversity and ecosystem services of South Africa as they can displace indigenous species, cause soil erosion and deplete water resources. The aim of the DNA Barcoding Invasive Species Project in North-West is to collect samples of invasive plant species in the province, as well as indigenous species that are invasive elsewhere, for DNA barcoding. It is hoped that such data will enable rapid and inexpensive identification of species in the future. Rapid identifications are invaluable for the Early Detection and Rapid Response Programme of the Working for Water Programme. Invasive species were collected from areas in the province suspected of having high levels of alien invasion, such as Ganyesa, Klerksdorp, Mahikeng, Potchefstroom, Rustenburg, Tlhlakgameng and the Vredefort Dome (Vaal River). Here we present sixteen species that were most frequently observed and sampled in these areas, namely: Araujia sericifera Brot., Argemone ochroleuca Sweet subsp. ochroleuca, Cereus jamacaru DC., Cosmos bipinnatus Cav., Datura stramonium L., Eucalyptus camaldulensis Dehnh., Gleditsia triacanthos L., Melia azedarach L., Nicotiana glauca Graham., Opuntia ficus-indica (La) Mill., Salix babylonica L. var. babylonica, Schinus molle L., Sesbania punicea (Cav.) Benth., Solanum elaeagnifolium Cav., Verbena bonariensis L. and Xanthium strumarium L. This contribution aims to provide a photographic guide for their identification, a short description of their morphology, and information on their biogeographical origin, impact on the environment and prohibiting legislation.Cowpea (Vigna unguiculata) is an edible leguminous crop cultivated by many subsistence farmers and rural communities in developing countries of the sub-tropical areas of the world. Cowpea is a very versatile, well adapted and nutritious grain legume. However cowpea seed are prone to fungal infestation under suboptimal storage conditions. Some of these fungi, including Aspergillus and Fusarium spp., produce their associated ...

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