Since early 2006, porcine epidemic diarrhea virus (PEDV) has been reemerging in immunized swine herds. Open reading frame 3 (ORF3) is the only accessory gene in the PEDV genome. The entire ORF3 genes of 12 PEDV field strains and one vaccine strain were sequenced. The ORF3 genes of Chinese PEDV field strains (excluding CH/GSJIII/07) contain a single 672- or 675-nucleotide (nt) ORF, which encodes a 223- or 224-aa-long peptide. However, the CV777 vaccine strain and CH/GSJIII/07 contain a 276-nt ORF because of a 49-nt deletion at nt 245-293. The Chinese PEDV field strains and PEDV reference strains are divided into three groups based on the phylogenetic relationship of their ORF3 genes. Chinese PEDV field strains (excluding CH/GSJIII/07) have a close phylogenetic relationship to Korean strains and are genetically different from the PEDV vaccine strains. However, CH/GSJIII/07 has a close phylogenetic relationship to two vaccine strains, suggesting that it might have evolved from a live vaccine strain. Chinese PEDV field strains (excluding CH/GSJIII/07) can be differentiated from PEDV vaccine strains by a nested RT-PCR method.
Here we report the rescue of a recombinant porcine reproductive and respiratory syndrome virus (PRRSV) carrying an enhanced green fluorescent protein (EGFP) reporter gene as a separate transcription unit. A copy of the transcription regulatory sequence for ORF6 (TRS6) was inserted between the N protein and 3′-UTR to drive the transcription of the EGFP gene and yield a general purpose expression vector. Successful recovery of PRRSV was obtained using an RNA polymerase II promoter to drive transcription of the full-length virus genome, which was assembled in a bacterial artificial chromosome (BAC). The recombinant virus showed growth replication characteristics similar to those of the wild-type virus in the infected cells. In addition, the recombinant virus stably expressed EGFP for at least 10 passages. EGFP expression was detected at approximately 10 h post infection by live-cell imaging to follow the virus spread in real time and the infection of neighbouring cells occurred predominantly through cell-to-cell-contact. Finally, the recombinant virus generated was found to be an excellent tool for neutralising antibodies and antiviral compound screening. The newly established reverse genetics system for PRRSV could be a useful tool not only to monitor virus spread and screen for neutralising antibodies and antiviral compounds, but also for fundamental research on the biology of the virus.
Wearable strain and temperature sensors are desired for human−machine interfaces, health monitoring, and human motion monitoring. Herein, the fibrous mat with aligned nanofibers of ionic liquid (IL)/thermoplastic polyurethane (TPU) ionogels is fabricated via an electrospinning technique. The resultant fibrous mat is cut into a rectangle specimen and electrodes are loaded along the direction perpendicular to the nanofiber orientation to design a high-performance multimodal sensor based on an ionic conducting mechanism. As a strain sensor, the obtained sensor exhibits a wide strain working range (0−200%), a fast response and recovery (119 ms), a low detection limit (0.1%), and good reproducibility because of the reversible and deformable ionic conductive pathways of the sensor. Moreover, the sensor also exhibits excellent temperature-sensing behaviors, including a monotonic thermal response, high sensitivity (2.75% °C−1 ), high accuracy (0.1 °C), a fast response time (2.46 s), and remarkable repeatability, attributable to the negative temperature coefficient behavior of the IL/TPU fibrous mat. More interestingly, the IL/TPU fibrous sensor possesses good breathability, which is desired for wearable electronics. Because of these excellent sensing capabilities in strain and temperature, the sensor can not only monitor tiny and large human motions but also detect respiration and proximity, exhibiting enormous potential in wearable electronics.
CH/S is a virulent porcine epidemic diarrhea virus (PEDV) strain and is used as the virulent strain to evaluate the protection rates of vaccines against PEDV infection in China. Here, we report the complete genome sequence of strain CH/S, which may aid in understanding the molecular characteristics of this strain.
P orcine reproductive and respiratory syndrome virus (PRRSV) is one of the most economically important viruses affecting the swine industry worldwide, resulting in significant economic losses each year (1-3). PRRSV is a small, enveloped, linear, single positive-stranded RNA virus and a member of the order Nidovirales, family Arteriviridae (4). Current vaccination strategies cannot effectively control PRRSV infection because of the high antigenic heterogeneity (5, 6), the replication in and destruction of lung alveolar macrophages (7-9), and the observed antibody-dependent enhancement of PRRSV (10, 11). Therefore, it is imperative to study PRRSV pathogenesis mechanisms so that more effective control measures can be developed.Heme oxygenase-1 (HO-1) is the rate-limiting enzyme of heme degradation, and it functions to catabolize free heme into biliverdin, carbon monoxide, and iron. HO-1 and its end products have antioxidant, anti-inflammatory, and antiviral properties, and it is known to be a pivotal cytoprotective enzyme (12). Upregulation of HO-1 expression suppresses replication of a number of viruses, including hepatitis C virus (HCV), HIV-1, hepatitis B virus (HBV), and influenza virus (13-17). Our previous work showed that PRRSV significantly downregulates HO-1
The fifth most important G genotype, G9 rotavirus, is recognized as an emerging genotype that is spreading around the world. Sequence analysis was completed of a rare group A rotavirus, strain G9P[23], that was designated rotavirus A pig/China/NMTL/2008/G9P[23] and abbreviated as NMTL. It was isolated from a piglet with diarrhea in China. Nucleotide sequence analysis revealed that the VP7 gene clustered within the G9 lineage VId. The VP4 gene clustered within the rare P[23] genotype. NMTL is the first porcine G9 stain reported in China. Thus, to further characterize the evolutionary diversity of the NMTL strain, all gene segments were used to draw a phylogenetic tree. Based on the new classification system of rotaviruses, the NMTL sequence revealed a G9-P[23]-I5-R1-C1-M1-A8-N1-T1-E1-H1 genotype with close similarity to human Wa-like and porcine strains. The results showed that (i) NSP2 and NSP4 genes of NMTL exhibited higher genetic relatedness to human group A rotaviruses than to porcine strains, (ii) the VP2 and VP4 genes clustered with porcine and porcine-like human strains, and (iii) VP1 genes clustered apart from the Wa-like human and porcine clusters. In view of rotavirus evolution, this report provides additional evidence to support the notion that the human and porcine rotavirus genomes might be related.
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