Bioremediation is a cost-effective and sustainable approach for treating polluted soils, but our ability to improve on current bioremediation strategies depends on our ability to isolate microorganisms from these soils. Although culturing is widely used in bioremediation research and applications, it is unknown whether the composition of cultured isolates closely mirrors the indigenous microbial community from contaminated soils. To assess this, we paired culture-independent (454-pyrosequencing of total soil DNA) with culture-dependent (isolation using seven different growth media) techniques to analyse the bacterial and fungal communities from hydrocarbon-contaminated soils. Although bacterial and fungal rarefaction curves were saturated for both methods, only 2.4% and 8.2% of the bacterial and fungal OTUs, respectively, were shared between datasets. Isolated taxa increased the total recovered species richness by only 2% for bacteria and 5% for fungi. Interestingly, none of the bacteria that we isolated were representative of the major bacterial OTUs recovered by 454-pyrosequencing. Isolation of fungi was moderately more effective at capturing the dominant OTUs observed by culture-independent analysis, as 3 of 31 cultured fungal strains ranked among the 20 most abundant fungal OTUs in the 454-pyrosequencing dataset. This study is one of the most comprehensive comparisons of microbial communities from hydrocarbon-contaminated soils using both isolation and high-throughput sequencing methods.
The present research studies the characterisation and the physico-chemical properties of an excavated fine fraction (<10 mm) from a Swedish landfill, the Högbytorp. The results showed that the fine fraction represents 38% by mass of the total excavated wastes and it contains mainly soil-type materials and minerals. Higher concentrations of zinc, copper, barium and chromium were found with concentrations higher than the Swedish Environmental Protection Agency (EPA) for contaminated soil. The found moisture and organic contents of the fine fraction were 23.5% and 16.6%, respectively. The analysed calorific value (1.7 MJ kg), the potential of CH (4.74 m t dry matter) and Total Organic Carbon (TOC) (5.6%) were low and offer low potential of energy. Sieving the fine fraction further showed that 80% was smaller than 2 mm. The fine represents a major fraction at any landfill (40%-70%), therefore, characterising the properties of this fraction is essential to find the potential of reusing/recycling or safely redisposing.
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