Bats are important ecosystems service providers, make a significant contribution to biodiversity and can be important pests and disease vectors. In spite of this, information on their migration and dispersal patterns is limited. In temperate bats, migration is most evident in females. This reflects seasonal differences in their habitat requirements, and the fact that seasonally suitable sites can be geographically distant. Tropical bats mainly migrate to track variation in food availability. Little direct information is available on the patterns and drivers of bat dispersal, although drivers may include mate competition and inbreeding avoidance. In many temperate species, differential energy requirements and local resource competition among the sexes drive sexual segregation in the summer: females remain philopatric to their natal region, and frequently to their natal colony, while males disperse. In contrast, many tropical Pteropodidae form single‐male/multi‐female groups in which local resource defence contributes to female‐biased or all‐offspring dispersal from the natal site. Population genetic studies are the most common source of evidence used to infer the spatial dynamics of bats. As expected, migratory species tend to have less genetically structured populations over large geographical scales due to mating outside of breeding areas, weak migratory connectivity and long‐distance movements. In contrast and as expected, populations of sedentary species tend to be more differentiated at smaller geographical scales. Despite this general pattern, a range of factors, including historical events, dispersal capabilities, and behavioural, ecological and geographical barriers, are implicated in the genetic partitioning of bat populations, irrespective of movement patterns. These factors limit the study of bat movements using only genetic methods. Combining population genetics with other methods, such as mark–recapture, tracking or stable isotope analysis, should provide more insight into the movements of these ecologically and economically important species.

In France, illegal hunting of the endangered ortolan bunting Emberiza hortulana has been defended for the sake of tradition and gastronomy. Hunters argued that ortolan buntings trapped in southwest France originate from large and stable populations across the whole of Europe. Yet, the European Commission referred France to the Court of Justice of the European Union (EU) in December 2016 for infringements to legislation (IP/16/4213). To better assess the impact of hunting in France, we combined Pan-European data from archival light loggers, stable isotopes, and genetics to determine the migration strategy of the species across continents. Ortolan buntings migrating through France come from northern and western populations, which are small, fragmented and declining. Population viability modeling further revealed that harvesting in southwest France is far from sustainable and increases extinction risk. These results provide the sufficient scientific evidence for justifying the ban on ortolan harvesting in France.

Each year, billions of songbirds cross large ecological barriers during their migration. Understanding how they perform this incredible task is crucial to predict how global change may threaten the safety of such journeys. Earlier studies based on radar suggested that most songbirds cross deserts in intermittent flights at high altitude, stopping in the desert during the day, while recent tracking with light loggers suggested diurnal prolongation of nocturnal flights and common non-stop flights for some species. We analyzed light intensity and temperature data obtained from geolocation loggers deployed on 130 individuals of ten migratory songbird species, and show that a large variety of strategies for crossing deserts exists between, but also sometimes within species. Diurnal stopover in the desert is a common strategy in autumn, while most species prolonged some nocturnal flights into the day. Non-stop flights over the desert occurred more frequently in spring than in autumn, and more frequently in foliage gleaners. Temperature recordings suggest that songbirds crossed deserts with flight bouts performed at various altitudes according to species and season, along a gradient ranging from low above ground in autumn to probably >2000 m above ground level, and possibly at higher altitude in spring. High-altitude flights are therefore not the general rule for crossing deserts in migrant songbirds. We conclude that a diversity of migration strategies exists for desert crossing among songbirds, with variations between but also within species.

Little is known about the wintering distribution of the European Nightjar Caprimulgus europaeus. We combined geolocator and GPS‐logger data from different sites in Western Europe to analyse migration routes and migration timing of this trans‐equatorial migrant. Nightjars followed a loop migration route during which they cross two ecological barriers, and converged near common stopover zones in Northern, Central and Western Africa, where they stayed for 2–3 weeks. Nightjars used the same stopover sites as several other European migrants, relying on small and discrete wintering areas within the Democratic Republic of Congo. This confirms the importance of these specific zones and highlights the vulnerability of Western European populations to habitat loss in their non‐breeding areas.

Article impact statement: Species population monitoring for conservation purposes remains strongly biased toward a few vertebrate taxa in wealthier countries.

Understanding of the movements of species at multiple scales is essential to appreciate patterns of population connectivity and in some cases, the potential for pathogen transmission. The serotine bat (Eptesicus serotinus) is a common and widely distributed species in Europe where it frequently harbours European bat lyssavirus type 1 (EBLV-1), a virus causing rabies and transmissible to humans. In the United Kingdom, it is rare, with a distribution restricted to south of the country and so far the virus has never been found there. We investigated the genetic structure and gene flow of E. serotinus across the England and continental Europe. Greater genetic structuring was found in England compared with continental Europe. Nuclear data suggest a single population on the continent, although further work with more intensive sampling is required to confirm this, while mitochondrial sequences indicate an east-west substructure. In contrast, three distinct populations were found in England using microsatellite markers, and mitochondrial diversity was very low. Evidence of nuclear admixture indicated strong male-mediated gene flow among populations. Differences in connectivity could contribute to the high viral prevalence on the continent in contrast with the United Kingdom. Although the English Channel was previously thought to restrict gene flow, our data indicate relatively frequent movement from the continent to England highlighting the potential for movement of EBLV-1 into the United Kingdom.

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Anthropogenic activities, such as agricultural intensification, caused large declines in biodiversity, including farmland birds. In addition to demographic consequences, anthropogenic activities can result in loss of genetic diversity, reduction of gene flow and altered genetic structure. We investigated the distribution of the genetic variation of a declining farmland and longdistance migratory bird, the ortolan bunting Emberiza hortulana, across its European breeding range to assess the impact of human-driven population declines on genetic diversity and structure in order to advise conservation priorities. The large population declines observed have not resulted in dramatic loss of genetic diversity, which is moderate to high and constant across all sampled breeding sites. Extensive gene flow occurs across the breeding range, even across a migratory divide, which contributes little to genetic structuring. However, gene flow is asymmetric, with the large eastern populations acting as source populations for the smaller western ones. Furthermore, breeding populations that underwent the largest declines, in Fennoscandia and Baltic countries, appear to be recently isolated, with no gene exchange occurring with the eastern or the western populations. These are signs for concern as declines in the eastern populations could affect the strength of gene flow and in turn affect the western populations. The genetic, and demographic, isolation of the northern populations make them particularly sensitive to loss of genetic diversity and to extinction as no immigration is occurring to counter-act the drastic declines. In such a situation, conservation efforts are needed across the whole breeding range: in particular, protecting the eastern populations due to their key role in maintaining gene flow across the range, and focussing on the northern populations due to their recent isolation and endangered status.