Mineral content affects the biological processes underlying beef quality. Muscle mineral concentration depends not only on intake-outtake balance and muscle type, but also on age, environment, breed, and genetic factors. To unveil the genetic factors involved in muscle mineral concentration, we applied a pairwise differential gene expression analysis in groups of Nelore steers genetically divergent for nine different mineral concentrations. Here, based on significant expression differences between contrasting groups, we presented candidate genes for the genetic regulation of mineral concentration in muscle. Functional enrichment and protein-protein interaction network analyses were carried out to search for gene regulatory processes concerning each mineral. The core genetic regulation for all minerals studied, except Zn, seems to rest on interactions between components of the extracellular matrix. Regulation of adipogenesis-related pathways was also significant in our results. Antagonistic patterns of gene expression for fatty acid metabolism-related genes may explain the Cu and Zn antagonistic effect on fatty acid accumulation. Our results shed light on the role of these minerals on cell function.
The aim of this study was to compare biological aspects of the Pachodynerus species occurring in the Parque Municipal das Araucárias, Guarapuava, Paraná, Southern Brazil. It was carried from December 2001 to December 2004. Forty one nests belonging to 5 species were collected, of which 17 Pachodynerus guadulpensis, 15 Pachodynerus sp., 1 Pachodynerus argentinus, 1 Pachodynerus ca guadulpensis and 7 Pachodynerus nasidens. The nesting activity of Pachodynerus sp., P. argentinus and P. guadulpensis occurred in similar periods, from December to March, with the exception of P.guadulpensis, that built one nest in October. Pachodynerus ca guadulpensis nested in March and P. nasidens from January to April. The nests of Pachodynerus species present a very similar architecture, comprising a linear series of cylindrical cells that fit perfectly into each other forming a continuous tube. With these results we were able to conclude that, even though Pachodynerus species present common characteristics, such as nest architecture, nesting activities and habitats in which they occur, the used resources, mortality rates, etc., vary among groups of species occurring in different regions.Keywords: nesting biology, Eumeninae, Pachodynerus, trap-nests.
Aspectos biológicos de diferentes espécies de
Podium angustifrons Kohl 1902 is a species of solitary wasp which nests in pre-existing cavities, with neotropical distribution in Argentina, Bolivia, Brazil, Colombia, Guyana and French Guyana. The aim of this study was to investigate the nesting biology of P. angustifrons, discussing aspects of their life history. To capture its nests, wooden trap-nests were installed in the Parque Municipal das Araucárias, Guarapuava (PR), Brazil, from January 2003 to April 2009. A total of 29 nests were collected, all during the warmer months. These showed no vestibular and intercalary cells, and their closures were made up of chewed plants and mud mixed with organic materials and resin-coated surfaces, sometimes showing a layer of lichens. The cells were provisioned with various wild species of cockroaches (Chorisoneura sp, Riata sp and Helgaia sp) in the nymph stage and/or adults. The sex ratio was 4.6 females per male, significantly higher that the expected 1:1. Most pre-pupae entered diapause in winter with development time ranging from 187 to 283 days for females and 180 to 283 days for males. Deaths occurred in 41.66% of cells provisioned, 33.33% were attributed to faulty development and 8.33% to Chrysididae.
Background: The high infectivity rates of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) and the prolonged duration of coronavirus disease 2019 (COVID-19) pandemics have contributed to the emergence of viral variants endowed with evolutionary advantages, leading to enhanced infectivity. The tracking of these lineages is urgent. However, the need to sequence whole-viral genomes through next-generation sequencing (NGS) represents a barrier hampering the massive identification of these variants. Therefore, in the current study, we developed Sanger-sequencing approaches targeting regions of interest containing vast lineage-defining mutations in the SARS-CoV-2 S gene and ORF8 region, allowing for unambiguous identification of all SARS-CoV-2 variants of concern (VOCs) and of interest (VOIs).Methods and results: Primers were designed for polymerase chain reaction (PCR) and nested-PCR to amplify and sequence samples with a low-viral burden. The primers’ annealing sites conservancy were checked in a large group of sequences. Amplification protocols were standardized, and sequencing reactions were performed in a cohort of samples for validation. The primers were highly efficient and sequencing of the targeted regions matched those generated by NGS in the same samples. The sequencing results allowed for the unambiguous identification of B.1.1.7, P.1 and P.2 samples, and would also allow the identification of B.1.617.2, B.1.351 and B.1.427/B.1.429 lineages, which were absent in our cohort.Conclusion: Implementing Sanger-sequencing-based approaches to identify SARS-CoV-2 lineages may represent an alternative to tracking these variants by more laboratories around the world and providing valuable molecular and epidemiologic information to inform health systems.
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