<p><strong>Abstract.</strong> Iron and phosphorous are essential to marine microorganisms in vast regions in oceans worldwide. Atmospheric inputs are important allochthonous sources of Fe and P. The variability in airborne Fe deposition is hypothesized to serve an important function in previous glacial–interglacial cycles, contributing to the variability in atmospheric CO<sub>2</sub> and ultimately the climate. Understanding the mechanisms underlying the mobilization of airborne Fe and P from insoluble to soluble forms is critical to evaluate the biogeochemical effects of these elements. In this study, we present a robust power-law correlation between fractional Fe solubility and non-sea-salt-sulfate / Total-Fe (nss-sulfate / Fe<sub>T</sub>) molar ratio independent of distinct sources of airborne Fe of natural and/or anthropogenic origins over the South China Sea. This area receives Asian dust and pollution outflows and Southeast Asian biomass burning. This correlation is also valid for nitrate and total acids, demonstrating the significance of acid processing in enhancing Fe mobilization. Such correlations are also found for P, yet source dependent. These relationships serve as straightforward parameters that can be directly incorporated into available atmosphere–ocean coupling models that facilitate the assessment of Fe and P fertilization effects. Although biomass burning activity may supply Fe to the bioavailable Fe pool, pyrogenic soils are possibly the main contributors, not the burned plants. This finding warrants a multidisciplinary investigation that integrates atmospheric observations with the resulting biogeochemistry in the South China Sea, which is influenced by atmospheric forcings and nutrient dynamics with monsoons.</p>
The optical properties of the gallium nitride (GaN) nanowires are examined by the transmission method in the ultraviolet-visible range (1–5 eV) and by the reflection method in the infrared range (500–4000 cm−1). The absorption edge of the GaN nanowires is blueshifted by 0.2 eV from the bulk edge. The temperature dependence of the energy gap is expressed by, Eg(T)=3.724−9.97×10−4/(861+T) eV. The plasma frequency and the free-carrier density of the GaN nanowires, deduced from the infrared reflectance minima, are estimated to be ωp=1100±120 cm−1 and nf=3.73×1017 cm−3, respectively. Obtaining the free-carrier density from the infrared reflectance spectra is especially useful in research on nanostructured semiconductors.
We propose a united-residue model of membrane proteins to investigate the structures of helix bundle membrane proteins (HBMPs) using coarse-grained (CG) replica exchange Monte-Carlo (REMC) simulations. To demonstrate the method, it is used to identify the ground state of HBMPs in a CG model, including bacteriorhodopsin (BR), halorhodopsin (HR), and their subdomains. The rotational parameters of transmembrane helices (TMHs) are extracted directly from the simulations, which can be compared with their experimental measurements from site-directed dichroism. In particular, the effects of amphiphilic interaction among the surfaces of TMHs on the rotational angles of helices are discussed. The proposed CG model gives a reasonably good structure prediction of HBMPs, as well as a clear physical picture for the packing, tilting, orientation, and rotation of TMHs. The root mean square deviation (RMSD) in coordinates of C(α) atoms of the ground state CG structure from the X-ray structure is 5.03 Å for BR and 6.70 Å for HR. The final structure of HBMPs is obtained from the all-atom molecular dynamics simulations by refining the predicted CG structure, whose RMSD is 4.38 Å for BR and 5.70 Å for HR.
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