This Perspective article highlights some of the traditional and non-traditional analytical tools that are presently used to characterize aqueous inorganic nanoscale clusters and polyoxometalate ions. The techniques discussed in this article include nuclear magnetic resonance spectroscopy (NMR), small angle X-ray scattering (SAXS), dynamic and phase analysis light scattering (DLS and PALS), Raman spectroscopy, and quantum mechanical computations (QMC). For each method we briefly describe how it functions and illustrate how these techniques are used to study cluster species in the solid state and in solution through several representative case studies. In addition to highlighting the utility of these techniques, we also discuss limitations of each approach and measures that can be applied to circumvent such limits as it pertains to aqueous inorganic cluster characterization.
To assess the contribution of physical features to enzyme catalysis, the enzymatic reaction has to be compared to a relevant uncatalyzed reaction. While such comparisons have been conducted for some hydrolytic and radical reactions, it is most challenging for biological hydride transfer and redox reactions in general. Here, the same experimental tools used to study the H-tunneling and coupled motions for enzymatic hydride transfer between two carbons were used in the study of an uncatalyzed model reaction. The enzymatic oxidations of benzyl alcohol and its substituted analogues mediated by alcohol dehydrogenases were compared to the oxidations by 9-phenylxanthylium cation (PhXn(+)). The PhXn(+) serves as an NAD(+) model, while the solvent, acetonitrile, models the protein environment. Experimental comparisons included linear free energy relations with Hammett reaction constant (ρ) of zero versus -2.7; temperature-independent versus temperature-dependent primary KIEs; deflated secondary KIEs with deuteride transfer (i.e., primary-secondary coupled motion) versus no coupling between secondary KIEs and H- or D-transfer; and large versus small secondary KIEs for the enzymatic versus uncatalyzed alcohol oxidation. Some of the differences may come from differences in the order of microscopic steps between the catalyzed versus uncatalyzed reactions. However, several of these comparative experiments indicate that in contrast to the uncatalyzed reaction the transition state of the enzymatic reaction is better reorganized for H-tunneling and its H-donor is better rehybridized prior to the C-H→C transfer. These findings suggest an important role for these physical features in enzyme catalysis.
The observed 1° isotope effect on 2° KIEs in H-transfer reactions has recently been explained on the basis of a H-tunneling mechanism that uses the concept that the tunneling of a heavier isotope requires a shorter donor-acceptor distance (DAD) than that of a lighter isotope. The shorter DAD in D-tunneling, as compared to H-tunneling, could bring about significant spatial crowding effect that stiffens the 2° H/D vibrations, thus decreasing the 2° KIE. This leads to a new physical organic research direction that examines how structure affects the 1° isotope dependence of 2° KIEs and how this dependence provides information about the structure of the tunneling ready states (TRSs). The hypothesis is that H- and D-tunneling have TRS structures which have different DADs, and pronounced 1° isotope effect on 2° KIEs should be observed in tunneling systems that are sterically hindered. This paper investigates the hypothesis by determining the 1° isotope effect on α- and β-2° KIEs for hydride transfer reactions from various hydride donors to different carbocationic hydride acceptors in solution. The systems were designed to include the interactions of the steric groups and the targeted 2° H/D's in the TRSs. The results substantiate our hypothesis, and they are not consistent with the traditional model of H-tunneling and 1°/2° H coupled motions that has been widely used to explain the 1° isotope dependence of 2° KIEs in the enzyme-catalyzed H-transfer reactions. The behaviors of the 1° isotope dependence of 2° KIEs in solution are compared to those with alcohol dehydrogenases, and sources of the observed "puzzling" 2° KIE behaviors in these enzymes are discussed using the concept of the isotopically different TRS conformations.
The secondary kinetic isotope effects for the hydride transfer reactions from aliphatic alcohols to two carbocations (NAD(+) models) in acetonitrile were determined. The results suggest that the hydride transfer takes place by tunneling and that the rehybridizations of both donor and acceptor carbons lag behind the H-tunneling. This is quite contrary to the observations in alcohol dehydrogenases where the importance of enzyme motions in catalysis is manifested.
We recently reported abnormal secondary deuterium kinetic isotope effects (2° KIEs) for hydride transfer reactions from alcohols to carbocations in acetonitrile (Chem. Comm. 2012, 48, 11337). Experimental 2° KIE values were found to be inflated on the 9-C position in the xanthylium cation but deflated on the β-C position in 2-propanol with respect to the values predicted by the semi-classical transition-state theory. No primary (1°) isotope effect on 2° KIEs was observed. Herein, the KIEs were replicated by the Marcus-like H-tunneling model that requires a longer donor–acceptor distance (DAD) in a lighter isotope transfer process. The 2° KIEs for a range of potential tunneling-ready-states (TRSs) of different DADs were calculated and fitted to the experiments to find the TRS structure. The observed no effect of 1° isotope on 2° KIEs is explained in terms of the less sterically hindered TRS structure so that the change in DAD due to the change in 1° isotope does not significantly affect the reorganization of the 2° isotope and hence the 2° KIE. The effect of 1° isotope on 2° KIEs may be expected to be more pronounced and thus observable in reactions occurring in restrictive environments such as the crowded and relatively rigid active site of enzymes.
Here, we employ a combination of 27 Al solidstate nuclear magnetic resonance (SSNMR) and conventional spectroscopic and microscopic techniques to investigate the structural evolution of aqueous aluminum precursors to a uniform and smooth aluminum oxide film. The route involves no organic ligands and relies on dehydration, dehydroxylation, and nitrate loss for condensation and formation of the threedimensional aluminum oxide structure. Local chemical environments are tracked as films evolve over the temperature range 200−1100 °C. 27 Al SSNMR reveals that Al centers are predominantly four-and five-coordinate in amorphous films annealed between 200 and 800 °C and four-and six-coordinate in crystalline phases that form above 800 °C. The Al coordination of the aqueous-deposited aluminum oxide films are compared to data from SSNMR studies on vapor-phasedeposited aluminum oxide thin films. Additionally, dielectric constants of aluminum oxide-based capacitors are measured and correlated with the SSNMR results. Aluminum oxide is an important material for protective coatings, catalysis, and microelectronic applications. For the latter application, amorphous materials are preferred, but a lack of long-range order complicates structural characterization and determination of structure−property relationships. Solution deposition approaches are attractive alternatives to traditional vapor-phase deposition methods because precursors are commonly stable in air, and they enable printing and direct lithographic patterning on common semiconductor wafers as well as large-area and flexible substratesuseful for scale-up to applications in windows and photovoltaic devices.
1H and 27Al NMR is used to reveal the motions of AlH4 anions in KAlH4. Line-narrowing from rotations and from translational diffusion is observed in the NMR of both nuclei. Unlike the anions in NaAlH4 and LiAlH4 that are not rotating on the NMR time scale at room temperature, the KAlH4 anions are already rotating rapidly at 23 °C. Based on the onset of rotation-induced line narrowing, the 1H T 1 minimum, and the low- temperature hydrogen T 1ρ minimum associated with reorientations, the rotational activation energy E rot,act = 0.28 eV is determined. Similarly, we use the onset temperature of translational motion-induced line narrowing and the high-temperature T 1ρ minimum to determine the diffusion activation energy E diff,act = 0.70 eV. Lack of sharp structure in the first-order quadrupole pattern and the absence of second-order quadrupole structure in the 27Al NMR data suggest asymmetry (η ≠ 0) and/or variations in the anion electric field gradients from structural disorder.
Solid-state 71Ga and 69Ga NMR was used to probe the structure of the hydroxo-aquo cluster, [Ga13(μ3-OH)6(μ2-OH)18(H2O)24](NO3)15, envisioned as a solution-processable material for thin film electronics. This species, termed Ga13, is made up of three types of 6-coordinate gallium sites, with bridging OH groups and H2O species decorating the outer edges. Solid-state NMR at two magnetic fields (13.9 and 21.1 T) of these quadrupolar nuclei, in conjunction with modeling, demonstrates that these sites are best represented as distorted octahedra, exhibiting a wide range of distinct quadrupolar couplings and asymmetry parameters. This information is critical for analyses of the local coordination environment for gallium in related gallium-oxide films, and this work adds to the growing body of evidence that gallium solid-state NMR is a useful tool for structural analyses.
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