Key Points:• ECOSTRESS is a state-of-the-art combination of thermal bands, spatial and temporal resolutions, and measurement accuracy and precision • Data from 82 eddy covariance sites were coalesced concurrently with the first year of ECOSTRESS for Stage 1 validation • Clear-sky ET from ECOSTRESS compared well against a wide range of eddy Abstract The ECOsystem Spaceborne Thermal Radiometer Experiment on Space Station (ECOSTRESS) was launched to the International Space Station on 29 June 2018 by the National Aeronautics and Space Administration (NASA). The primary science focus of ECOSTRESS is centered on evapotranspiration (ET), which is produced as Level-3 (L3) latent heat flux (LE) data products. These data are generated from the Level-2 land surface temperature and emissivity product (L2_LSTE), in conjunction with ancillary surface and atmospheric data. Here, we provide the first validation (Stage 1, preliminary) of the global ECOSTRESS clear-sky ET product (L3_ET_PT-JPL, Version 6.0) against LE measurements at 82 eddy covariance sites around the world. Overall, the ECOSTRESS ET product performs well against the site measurements (clear-sky instantaneous/time of overpass: r 2 = 0.88; overall bias = 8%; normalized root-mean-square error, RMSE = 6%). ET uncertainty was generally consistent across climate zones, biome types, and times of day (ECOSTRESS samples the diurnal cycle), though temperate sites are overrepresented. The 70-m-high spatial resolution of ECOSTRESS improved correlations by 85%, and RMSE by 62%, relative to 1-km pixels. This paper serves as a reference for the ECOSTRESS L3 ET accuracy and Stage 1 validation status for subsequent science that follows using these data.
With salt stress presenting a major threat to global food production, attention has turned to the identification and breeding of crop cultivars with improved salt tolerance. For instance, some accessions of wild species with higher salt tolerance than commercial varieties are being investigated for their potential to expand food production into marginal areas or to use brackish waters for irrigation. However, assessment of individual plant responses to salt stress in field trials is time-consuming, limiting, for example, longitudinal assessment of large numbers of plants. Developments in Unmanned Aerial Vehicle (UAV) sensing technologies provide a means for extensive, repeated and consistent phenotyping and have significant advantages over standard approaches. In this study, 199 accessions of the wild tomato species, Solanum pimpinellifolium , were evaluated through a field assessment of 600 control and 600 salt-treated plants. UAV imagery was used to: (1) delineate tomato plants from a time-series of eight RGB and two multi-spectral datasets, using an automated object-based image analysis approach; (2) assess four traits, i.e., plant area, growth rates, condition and Plant Projective Cover (PPC) over the growing season; and (3) use the mapped traits to identify the best-performing accessions in terms of yield and salt tolerance. For the first five campaigns, >99% of all tomato plants were automatically detected. The omission rate increased to 2–5% for the last three campaigns because of the presence of dead and senescent plants. Salt-treated plants exhibited a significantly smaller plant area (average control and salt-treated plant areas of 0.55 and 0.29 m 2 , respectively), maximum growth rate (daily maximum growth rate of control and salt-treated plant of 0.034 and 0.013 m 2 , respectively) and PPC (5–16% difference) relative to control plants. Using mapped plant condition, area, growth rate and PPC, we show that it was possible to identify eight out of the top 10 highest yielding accessions and that only five accessions produced high yield under both treatments. Apart from showcasing multi-temporal UAV-based phenotyping capabilities for the assessment of plant performance, this research has implications for agronomic studies of plant salt tolerance and for optimizing agricultural production under saline conditions.
Thermal infrared cameras provide unique information on surface temperature that can benefit a range of environmental, industrial and agricultural applications. However, the use of uncooled thermal cameras for field and unmanned aerial vehicle (UAV) based data collection is often hampered by vignette effects, sensor drift, ambient temperature influences and measurement bias. Here, we develop and apply an ambient temperature-dependent radiometric calibration function that is evaluated against three thermal infrared sensors (Apogee SI-11(Apogee Electronics, Santa Monica, CA, USA), FLIR A655sc (FLIR Systems, Wilsonville, OR, USA), TeAx 640 (TeAx Technology, Wilnsdorf, Germany)). Upon calibration, all systems demonstrated significant improvement in measured surface temperatures when compared against a temperature modulated black body target. The laboratory calibration process used a series of calibrated resistance temperature detectors to measure the temperature of a black body at different ambient temperatures to derive calibration equations for the thermal data acquired by the three sensors. As a point-collecting device, the Apogee sensor was corrected for sensor bias and ambient temperature influences. For the 2D thermal cameras, each pixel was calibrated independently, with results showing that measurement bias and vignette effects were greatly reduced for the FLIR A655sc (from a root mean squared error (RMSE) of 6.219 to 0.815 degrees Celsius (℃)) and TeAx 640 (from an RMSE of 3.438 to 1.013 ℃) cameras. This relatively straightforward approach for the radiometric calibration of infrared thermal sensors can enable more accurate surface temperature retrievals to support field and UAV-based data collection efforts.
Biomass and yield are key variables for assessing the production and performance of agricultural systems. Modeling and predicting the biomass and yield of individual plants at the farm scale represents a major challenge in precision agriculture, particularly when salinity and other abiotic stresses may play a role. Here, we evaluate a diversity panel of the wild tomato species ( Solanum pimpinellifolium ) through both field and unmanned aerial vehicle (UAV)-based phenotyping of 600 control and 600 salt-treated plants. The study objective was to predict fresh shoot mass, tomato fruit numbers, and yield mass at harvest based on a range of variables derived from the UAV imagery. UAV-based red–green–blue (RGB) imageries collected 1, 2, 4, 6, 7, and 8 weeks before harvest were also used to determine if prediction accuracies varied between control and salt-treated plants. Multispectral UAV-based imagery was also collected 1 and 2 weeks prior to harvest to further explore predictive insights. In order to estimate the end of season biomass and yield, a random forest machine learning approach was implemented using UAV-imagery-derived predictors as input variables. Shape features derived from the UAV, such as plant area, border length, width, and length, were found to have the highest importance in the predictions, followed by vegetation indices and the entropy texture measure. The multispectral UAV imagery collected 2 weeks prior to harvest produced the highest explained variances for fresh shoot mass (87.95%), fruit numbers (63.88%), and yield mass per plant (66.51%). The RGB UAV imagery produced very similar results to those of the multispectral UAV dataset, with the explained variance reducing as a function of increasing time to harvest. The results showed that predicting the yield of salt-stressed plants produced higher accuracies when the models excluded control plants, whereas predicting the yield of control plants was not affected by the inclusion of salt-stressed plants within the models. This research demonstrates that it is possible to predict the average biomass and yield up to 8 weeks prior to harvest within 4.23% of field-based measurements and up to 4 weeks prior to harvest at the individual plant level. Results from this work may be useful in providing guidance for yield forecasting of healthy and salt-stressed tomato plants, which in turn may inform growing practices, logistical planning, and sales operations.
Remote sensing based estimation of evapotranspiration (ET) provides a direct accounting of the crop water use. However, the use of satellite data has generally required that a compromise between spatial and temporal resolution is made, i.e., one could obtain low spatial resolution data regularly, or high spatial resolution occasionally. As a consequence, this spatiotemporal trade-off has tended to limit the impact of remote sensing for precision agricultural applications. With the recent emergence of constellations of small CubeSat-based satellite systems, these constraints are rapidly being removed, such that daily 3 m resolution optical data are now a reality for earth observation. Such advances provide an opportunity to develop new earth system monitoring and assessment tools. In this manuscript we evaluate the capacity of CubeSats to advance the estimation of ET via application of the Priestley-Taylor Jet Propulsion Laboratory (PT-JPL) retrieval model. To take advantage of the high-spatiotemporal resolution afforded by these systems, we have integrated a CubeSat derived leaf area index as a forcing variable into PT-JPL, as well as modified key biophysical model parameters. We evaluate model performance over an irrigated farmland in Saudi Arabia using observations from an eddy covariance tower. Crop water use retrievals were also compared against measured irrigation from an in-line flow meter installed within a center-pivot system. To leverage the high spatial resolution of the CubeSat imagery, PT-JPL retrievals were integrated over the source area of the eddy covariance footprint, to allow an equivalent intercomparison. Apart from offering new precision agricultural insights into farm operations and management, the 3 m resolution ET retrievals were shown to explain 86% of the observed variability and provide a relative RMSE of 32.9% for irrigated maize, comparable to previously reported satellite-based retrievals. An observed underestimation was diagnosed as a possible misrepresentation of the local surface moisture status, highlighting the challenge of high-resolution modeling applications for precision agriculture and informing future research directions. .
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