The spread of invasive plants along elevational gradients is considered a threat to fragile mountain ecosystems, but it can also provide the opportunity to better understand some of the basic processes driving the success of invasive species. Ageratina adenophora (Asteraceae) is an invasive plant of global importance and has a broad distribution along elevational gradients in the Western Himalayas. Our study aimed at understanding the role of evolutionary processes (e.g. local adaptation and clinal differentiation) and different life history stages in shaping the distribution pattern of the invasive plant along an elevational gradient in the Western Himalaya. We carried out extensive distributional surveys, established a reciprocal transplant experiment with common gardens at three elevational levels, and measured a suite of traits related to germination, growth, reproduction and phenology. Our results showed a lack of local adaptation, and we did not find any evidence for clinal differentiation in any measured trait except a rather weak signal for plant height. We found that seed germination was the crucial life-cycle transition in determining the lower range limit while winter mortality of plants shaped the upper range limit in our study area, thus explaining the hump shaped distribution pattern. Differences in trait values between gardens for most traits indicated a high degree of phenotypic plasticity. Possible causes such as apomixis, seed dispersal among sites, and pre-adaptation might have confounded evolutionary processes to act upon. Our results suggest that the success and spread of Ageratina adenophora are dependent on different life history stages at different elevations that are controlled by abiotic conditions.
Aim Ecological inferences drawn from studies on niche dynamics of invasive species are often limited due to difficulties in disentangling evolutionary adaptations of the fundamental niche from demographic and interspecific processes shaping the realized niche. We used Ageratina adenophora, an invasive plant with restricted evolutionary potential to investigate shifts in the realized climatic niche independent of potential evolutionary adaptations. Location Native Mexican range; exotic ranges in Asia, the USA, the Canary Islands and Australia. Taxon Invasive Asteraceae A. adenophora (Spreng.) R.M.King & H.Rob. Commonly known as Crofton weed. Methods We compiled a robust occurrence dataset of A. adenophora for its native Mexican range and four exotic ranges (Asia, USA, Canary Islands, and Australia) and quantified pairwise niche overlap (Schoener's D) and niche dynamic (stable, unfilling and expansion) indices between the native and exotic ranges in reduced climatic space using smoothed occurrence densities. Niche shift was statistically tested using niche equivalency tests. Results The value of niche overlap (Schoener's D) differed considerably, ranging from relatively high between Mexico and Asia to low between Mexico and Australia. The niche dynamic indices indicated highest level of niche stability in Asia while highest degree of unstable niche was detected in Australia due to both niche expansion and unfilling. The niche similarity tests indicated that the native niche is more similar to the exotic niche than any randomly sampled niche from the exotic range. However, the niche equivalency tests showed evidence of niche differentiation as the observed niche overlap was lower than expected by chance for all pairwise comparisons. Jointly these tests indicate that despite the similarity, the native niche is not perfectly identical to any of the exotic niches. Main conclusions The current study has direct implications for understanding range expansion of invasive species even in the absence of evolutionary adaptation. Our study indicates that invasive species can occupy different, non‐consistent realized climatic niches in different parts of the world, thus limiting the transferability of species distribution models and corresponding risk assessments or future projections.
Methodological research on species distribution modelling (SDM) has so far largely focused on the choice of appropriate modelling algorithms and variable selection approaches, but the consequences of choosing amongst different sources of environmental data has scarcely been investigated. Bioclimatic variables are commonly used as predictors in SDMs. Currently, several online databases offer the same sets of bioclimatic variables, but they differ in underlying source of raw data and method of data processing (extrapolation and downscaling). In this paper, we asked whether predictive performance and spatial transferability of SDMs are affected by the choice of two different bioclimatic databases viz. WorldClim 2 and Chelsa 1.2. We used presence-absence data of the invasive plant Ageratina adenophora from the Western Himalaya for training SDMs and a set of independently-collected presence-only datasets from the Central and Eastern Himalaya to evaluate the transferability of the SDMs beyond the training range. We found that the performance of SDMs was, to a large degree, affected by the choice of the climatic dataset. Models calibrated on Chelsa 1.2 outperformed WorldClim 2 in terms of internal evaluation on the calibration dataset. However, when the model was transferred beyond the calibration range to the Central and Eastern Himalaya, models based on WorldClim 2 performed substantially better. We recommend that, in addition to the choice of predictor variables, the choice of predictor datasets with these variables should not be based merely on subjective decision whenever several options are available. Instead, such decisions should be based on robust evaluation of the most appropriate dataset for a given geographic region and species being modelled. Moreover, decisions could also depend on the objective of the study, i.e. projecting within the calibration range or beyond. Therefore, a quantitative evaluation of predictor datasets from alternative sources should be routinely performed as an integral part of the modelling procedure.
The regulation of biological invasions is often focussed at the species level. However, the risks posed by infra- and inter-specific entities can be significantly different from the risks posed by the corresponding species, to the extent that they should be regulated and managed differently. In particular, many ornamental plants have been the subject of long-term breeding and selection programmes, with an increasing focus on trying to develop cultivars and hybrids that are less invasive. In this paper, we frame the problem of determining the risk of invasion posed by cultivars or hybrids as a set of six questions that map on to the key components of a risk analysis, viz., risk identification, risk assessment, risk management, and risk communication. 1) Has an infra- or inter-specific entity been proposed as “safe to use” despite at least one of the corresponding species being a harmful invasive? 2) What are the trait differences between the proposed safe alternative and its corresponding invasive species? 3) Do the differences in traits translate into a difference in invasion risk that is significant for regulation? 4) Are the differences spatially and temporally stable? 5) Can the entities be distinguished from each other in practice? 6) What are the appropriate ways to communicate the risks and what can be done to manage them? For each question, we use examples to illustrate how they might be addressed focussing on plant cultivars that are purported to be safe due to sterility. We review the biological basis of sterility, methods used to generate sterile cultivars, and the methods available to confirm sterility. It is apparent that separating invasive genetic entities from less invasive, but closely related, genetic entities in a manner appropriate for regulation currently remains unfeasible in many circumstances – it is a difficult, expensive and potentially fruitless endeavour. Nonetheless, we strongly believe that an a priori assumption of risk should be inherited from the constituent taxa and the onus (and cost) of proof should be held by those who wish to benefit from infra- (or inter-) specific genetic entities. The six questions outlined here provide a general, science-based approach to distinguish closely-related taxa based on the invasion risks they pose.
The need to understand and manage biological invasions has driven the development of frameworks to circumscribe, classify, and elucidate aspects of the phenomenon. But how influential have these frameworks really been? To test this, we evaluated the impact of a pathway classification framework, a framework focussing on the introduction-naturalisation-invasion continuum, and two papers that outline an impact classification framework. We analysed how these framework papers are cited and by whom, conducted a survey to determine why people have cited the frameworks, and explored the degree to which the frameworks are implemented. The four papers outlining these frameworks are amongst the most-cited in their respective journals, are highly regarded in the field, and are already seen as citation classics (although citations are overwhelmingly within the field of invasion science). The number of citations to the frameworks has increased over time, and, while a significant proportion of these are self-citations (20–40%), this rate is decreasing. The frameworks were cited by studies conducted and authored by researchers from across the world. However, relative to a previous citation analysis of invasion science as a whole, the frameworks are particularly used in Europe and South Africa and less so in North America. There is an increasing number of examples of uptake into invasion policy and management (e.g., the pathway classification framework has been adapted and adopted into EU legislation and CBD targets, and the impact classification framework has been adopted by the IUCN). However, we found that few of the citing papers (6–8%) specifically implemented or interrogated the frameworks; roughly half of all citations might be viewed as frivolous (“citation fluff”); there were several clear cases of erroneous citation; and some survey respondents felt that they have not been rigorously tested yet. Although our analyses suggest that invasion science is moving towards a more systematic and standardised approach to recording invasions and their impacts, it appears that the proposed standards are still not applied consistently. For this to be achieved, we argue that frameworks in invasion science need to be revised or adapted to particular contexts in response to the needs and experiences of users (e.g., so they are relevant to pathologists, plant ecologists, and practitioners), the standards should be easier to apply in practice (e.g., through the development of guidelines for management), and there should be incentives for their usage (e.g., recognition for completing an EICAT assessment).
Contamination of soil by antibiotics and heavy metals originating from hospital facilities has emerged as a major cause for the development of resistant microbes. We collected soil samples surrounding a hospital effluent and measured the resistance of bacterial isolates against multiple antibiotics and heavy metals. One strain BMCSI 3 was found to be sensitive to all tested antibiotics. However, it was resistant to many heavy metals and metalloids like cadmium, chromium, copper, mercury, arsenic, and others. This strain was motile and potentially spore-forming. Whole-genome shotgun assembly of BMCSI 3 produced 4.95 Mb genome with 4,638 protein-coding genes. The taxonomic and phylogenetic analysis revealed it, to be a Bordetella petrii strain. Multiple genomic islands carrying mobile genetic elements; coding for heavy metal resistant genes, response regulators or transcription factors, transporters, and multi-drug efflux pumps were identified from the genome. A comparative genomic analysis of BMCSI 3 with annotated genomes of other free-living B. petrii revealed the presence of multiple transposable elements and several genes involved in stress response and metabolism. This study provides insights into how genomic reorganization and plasticity results in evolution of heavy metals resistance by acquiring genes from its natural environment.
The present article deals with the rediscovery of Jasminum parkeri Dunn (Oleaceae) collected from its type locality after a lapse of about 100 years. J. parkeri is a highly endangered and narrowly endemic taxon restricted to a small pocket in the remote mountain area of Chamba district, Himachal Pradesh in the western Himalaya, India. In order to facilitate identification of this species, the plant description along with a brief history of its discovery, affinity with the other taxa of Jasminum, ecological notes, and pictures are provided. Subsequently, possibility of cultivation of this species in ex-situ conditions is also discussed.
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